KEGG   Populus nigra (Lombardy poplar): 133700759
Entry
133700759         CDS       T10372                                 
Name
(RefSeq) B-type cell cycle switch protein ccs52A-like
  KO
K03364  cell division cycle 20-like protein 1, cofactor of APC complex
Organism
pnz  Populus nigra (Lombardy poplar)
Pathway
pnz04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:pnz00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    133700759
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:pnz04121]
    133700759
Ubiquitin system [BR:pnz04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   APC/C
    Target recognizing subunit
     133700759
SSDB
Motif
Pfam: WD40_CDC20-Fz Beta-prop_WDR5 Beta-prop_WDR3_1st Beta-prop_THOC3 WD40 WD40_WDHD1_1st Beta-prop_EML_2 WD40_Prp19 Beta-prop_CAF1B_HIR1 Beta-prop_WDR3_2nd Beta-prop_WDR19_1st Beta-prop_TEP1_2nd Beta-prop_EML WD40_Gbeta WD40_MABP1-WDR62_2nd Beta-prop_WDR36-Utp21_2nd EIF3I ANAPC4_WD40 Beta-prop_Aladin WDR55 Beta-prop_IFT140_1st Beta-prop_WDR36-Utp21_1st Beta-prop_WDR90_POC16_2nd Beta-prop_RIG_2nd Beta-prop_IFT122_1st eIF2A WD40_MABP1-WDR62_1st WDR90_beta-prop_4th Beta-prop_HPS5 Beta-prop_RIG_1st NBCH_WD40 Peptidase_M10_C Tricorn_2nd Beta-prop_WDR41 Beta-prop_DCAF4 Beta-prop_WDR35_TULP_N Beta-prop_SPT8 Beta-prop_Vps41 Beta-prop_SCAP Beta-prop_VPS8 Beta-prop_IFT140_2nd
Other DBs
NCBI-GeneID: 133700759
NCBI-ProteinID: XP_061980398
LinkDB
Position
8:14355070..14359340
AA seq 492 aa
MADPTMSPPSQSQLNVAASTTQRRQHHLNLESLAPSPSSSEHVNRLINSNHYISPSRPIY
SDRFIPCRSSSNFALFNISLPSPSATAGSSPGDGGKEDNPNAYAALLRNALFGPQTPDKK
DWGTGAAGRNIFRYKTETRQSMHSLSPFGFDGLSGPGVSNVAIKAPRKVSRSPYKVLDAP
ALHDDFYLNLVDWSSHNVLAVGLGTCVYLWNACSSKVTKLCDLGNDDGVCSVGWAHRGTH
LAVGTSNGKVQIWDASRCKRIRIMEGHRLRVGALAWSSSMLSSGSRDKSILQRDIRAQED
FVSKLSGHKSEVCGLKWSYDNRELASGGNDNRLFVWNQHSTQPVLKYCEHTAAVKAIAWS
PHLHGLLASGGGTADRCIRFWNTTTNSHLSCMDTGSQVCNLVWSKNVNELVSTHGYSQNQ
IIVWRYPTMSKLATLTGHTYRVLYLAISPDGQTIVTGAGDETLRFWNVFPSPKSQNTESE
IGASSLGRTTIR
NT seq 1479 nt   +upstreamnt  +downstreamnt
atggccgatcccacgatgtcaccgccaagccaatcgcagctcaacgttgcagcttccacg
acgcaacgtcgtcaacatcatttaaatcttgaaagcctagctccatcaccgtcatcatcg
gaacatgtcaaccgtctgattaattctaatcattatatttccccctcgagacctatttac
tccgataggtttattccctgtagatccagctcgaatttcgctcttttcaacatctctttg
ccctcgccttctgcaaccgcgggtagttcgccgggggacggagggaaggaggacaatccc
aatgcgtatgcggcgttactcaggaatgcactctttggtcctcagactccggataagaaa
gactgggggacaggggcggctggacggaatattttccggtacaagacggagactaggcag
tcaatgcactcgctttcgcctttcgggtttgatggtttaagtggtcctggtgttagtaat
gttgctattaaggctcctaggaaggtttctagatcaccatataaggtattggatgcccct
gcattgcatgatgatttttatttgaatttggtggattggtcgtcgcataatgtgttggca
gtggggttagggacttgtgtgtatttatggaatgcttgtagtagcaaggtgaccaaactg
tgtgatttggggaatgatgatggtgtatgttcagtaggatgggctcatcgtggtacacat
cttgctgttggaaccagcaatgggaaagttcagatttgggatgcttcacgctgtaaaagg
attagaatcatggagggtcatcgattgcgagttggggccttggcctggagttcatcaatg
ctgtcttctggtagccgggataagagcattcttcaacgagatatacgagcacaagaagac
tttgttagtaaactctctggacacaagtcagaggtttgtggactgaagtggtcttatgat
aaccgtgagttagcatcaggcggaaatgataatcgactttttgtttggaatcaacattca
acccaacctgtgctaaaatactgtgagcatacagcggctgtaaaagcaattgcttggtca
ccccatcttcatggacttcttgcatccgggggtgggactgctgaccggtgtatacgattc
tggaatacaaccaccaactcacatctcagctgcatggacaccggcagtcaggtgtgcaat
cttgtgtggtctaagaatgtcaatgaactagtcagcacacatggatactcccaaaaccaa
ataatagtatggagataccccaccatgtcaaagttggcaactctgacaggccatacatac
agagttctttatcttgccatctcaccagacggacagacaattgtcactggagctggagat
gaaactctgcggttttggaatgtgttcccttcccctaaatctcagaacacagagagtgaa
attggagcatcatctctgggaagaactacaatccggtga

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