Populus nigra (Lombardy poplar): 133700960
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Entry
133700960 CDS
T10372
Name
(RefSeq) cullin-1-like
KO
K03347
cullin 1
Organism
pnz Populus nigra (Lombardy poplar)
Pathway
pnz04120
Ubiquitin mediated proteolysis
pnz04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
133700960
04120 Ubiquitin mediated proteolysis
133700960
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pnz04121
]
133700960
Ubiquitin system [BR:
pnz04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Cullin
133700960
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Cullin
Cullin_Nedd8
DUF3232
DUF5903
Motif
Other DBs
NCBI-GeneID:
133700960
NCBI-ProteinID:
XP_061980687
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Position
8:13984711..13991242
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AA seq
738 aa
AA seq
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MSKDRKTTELEEGWEYMQNGISKLKGILDGSLEQFSSEEYMMLYTTIYNMCTQKPPNDYS
QQLYDKYREAFQVYINSTVLPSIREKHDEFMLRELVKRWVNHKIMVRWLSRFFNYLDRYF
IARRSLPPLNEVGLTCFRDLVYQEVHSQAKDAVLDVIGKERDGEQIDRALLKNVLDIYVE
IGMSQMDHYADDFEAHMLQGTGAYYSVKAANWIREDSCPDYMIKAEECLKRERDRVSHYL
HSSSEIKLVEKVQHELLVVNANQLLEKEHSGVRALLRDDKVEDLSRMFRLYHKVTRGLEP
VSNVFKQHITAEGTALIQQAEDAASSQAANGGVQEQVLIRKIIELHDKYMTYVTACFQNH
TLFHKAMKEAFEIFCNKTVAGSSSAELLATFCDTILRKGGSEKLSDEAIEETLEKVVKLL
AFISDKDLFAEFYRKKLARRLLFDRSANDEHERSILSKLKQQCGGQFTSKMEGMVTDLQL
AKEHQSSFDEYLANNPSTRLGIDLQVNVLTTGYWPTYKSSDINLPAEMARGVEVFKEFYD
LKSKHRKLTWIYSLGSCHINAKFDQKTIELVVTTYQACLLMLFNTSDKLSYSEIMTQSNL
SDDDLPRLLHSLSCGKYKILSKEPNTKTVNQNDYFEFNHKFNDRMRRIKVPLPLVDERKK
VVEDVDKDRRYAIDAAIVRIMKSRKVLGHQQLVLECVEQLNLMFKPDIKAIKKRIEDLIS
RDYLERDKENPNMFKYLA
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaggatcgcaagactaccgaacttgaggagggatgggaatatatgcagaatggg
atctcaaagctgaaggggatcctggatggatcactagagcaattcagctctgaagaatat
atgatgctttacacaactatctacaatatgtgtactcagaagccaccaaatgactattct
caacagctttatgacaagtatagggaagcttttcaagtatatattaactccacggtatta
ccatcaataagggagaaacatgatgagtttatgctgagggagcttgtaaaaagatgggtt
aatcataaaattatggttaggtggttgtcacgcttcttcaattatcttgaccgttacttc
attgctcggaggtcacttccaccacttaatgaagttggactgacttgcttccgtgatctg
gtttatcaggaagtgcatagtcaagccaaggatgctgtgcttgatgtgattggtaaagaa
cgtgatggggaacagatagacagagcactgctaaagaatgttttagatatatacgttgag
attggaatgtcacaaatggatcattatgcagatgattttgaagcacacatgcttcaaggt
actggtgcttactattctgttaaagcagcaaactggattcgagaggattcttgtccagat
tacatgataaaggctgaggaatgcttgaagagagagagggatagagtttctcactacttg
cattcaagcagtgagataaaattagtggagaaagtgcaacatgagttattggtggtcaat
gcaaatcaactgctagagaaggaacattctggagttcgtgcattgctcagagatgacaag
gtggaagatctatccaggatgtttaggctttatcataaggttacccgtggcttggaacct
gtttctaatgtattcaagcagcatattactgctgaaggaacagccttgatccagcaagca
gaagacgctgcgagtagccaggctgcaaatggtggtgttcaggaacaagttctcattcga
aagataattgagctgcatgataaatacatgacttatgtgactgcttgttttcaaaaccac
acattgtttcacaaggccatgaaagaggcttttgagatcttttgcaataaaacagttgct
gggagctcaagtgctgaactactggcaaccttttgtgacactatcctccgaaagggtgga
agtgagaaactaagtgatgaagccattgaagaaacactggagaaggtggttaagctgctt
gcatttattagtgacaaggacctttttgctgaattttataggaaaaaacttgcccgtcga
cttctttttgatcggagtgctaacgatgaacatgaaaggagtatactgtcaaaattgaag
cagcaatgtggtggacaatttacctcaaagatggaaggaatggtcacagatttgcaattg
gcaaaggaacatcagtccagctttgatgagtatcttgccaataacccatccacacgtctg
gggattgatttgcaagtaaatgttctcacaactgggtactggccaacatataaatcctct
gatatcaacctacctgcagaaatggctaggggagtggaagttttcaaggagttctatgac
ctgaagagcaagcacagaaaactaacatggatttactctttgggatcttgccacattaat
gccaagtttgaccaaaaaactattgagctggttgtgacgacctaccaggcttgtctcctg
atgctttttaatacttcagacaaactcagttattcagagattatgacccagtcaaacttg
agtgatgatgacttgcctagattgcttcattccctgtcatgtggcaagtataaaatcctt
agcaaggagccaaacacaaagactgttaaccaaaatgattactttgagttcaatcacaag
ttcaatgataggatgaggaggatcaaggttcctcttccacttgttgatgaaagaaagaag
gttgttgaagatgtcgacaaagacagacggtatgctattgatgctgcaattgtgcgcatc
atgaagagtcggaaagtgttgggtcatcaacagcttgtcttggagtgtgttgagcagttg
aatctcatgttcaagcctgacattaaagctatcaagaagcggatagaagatctgatctcc
cgagattatttagaaagagacaaggaaaacccaaacatgttcaagtacctggcttga
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