Populus nigra (Lombardy poplar): 133701104
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Entry
133701104 CDS
T10372
Name
(RefSeq) protein SHI RELATED SEQUENCE 6-like isoform X1
KO
K27807
short internodes/stylish family transcription factor
Organism
pnz Populus nigra (Lombardy poplar)
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pnz03000
]
133701104
Transcription factors [BR:
pnz03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
133701104
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Gene cluster
GFIT
Motif
Pfam:
DUF702
Herpes_capsid
Motif
Other DBs
NCBI-GeneID:
133701104
NCBI-ProteinID:
XP_061980889
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Position
8:complement(19994794..19998756)
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AA seq
287 aa
AA seq
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MLGLHNILFIAPPPSSCHHQQPPHVPSTHQITNTNDQYGIADNQESWNPLKKYPQESSFL
ERGTLNALQDCDTAINIGPARACRDCGNRAKKECQYRRCRTCCKSRGYECTTHLKSTWVP
AARRRERLGYSSGGGGGSSASSSGGGCIGGKRPRENVPATSNSFSTSNNNAAASFVLDTG
SSFQDATFKQSLPVQVHAPAVFRCVRVSAINSDEAEVAYEAKVNISGHVFKGFLYDQGMD
EKNLFPCISKMHSSERNRDSSSPIVDPPDAYAASGNQRLLEGTNCTT
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgttaggccttcacaatattctctttatagctccaccaccatcttcttgtcaccaccag
cagccaccacacgttccctctactcaccaaataaccaataccaatgaccaatatggcatt
gcagacaatcaagagtcttggaaccctctaaagaaatacccgcaagaatcaagttttctt
gaaaggggaactttaaatgctcttcaggattgtgatactgcaataaatattggtcctgca
agagcatgtagggactgtggaaacagggcaaagaaagagtgtcagtacaggaggtgcagg
acttgttgcaagagtagagggtatgagtgtaccactcacctgaagagcacatgggtgcct
gctgcgaggaggcgcgagaggcttggttatagtagcggcggcggcggcggctcctctgct
tcttcttctggtggtggctgtattggtggtaagagaccaagagaaaatgtgcctgctaca
tccaatagttttagtacttctaataacaatgctgctgcttcttttgttttggatactggc
tctagtttccaggatgcaaccttcaaacagtccttaccagttcaagttcacgccccagca
gttttcaggtgcgttagagtgtcagccattaacagtgatgaagctgaggttgcctatgaa
gctaaggtgaatataagcggtcatgttttcaagggctttctttatgatcaagggatggat
gagaaaaacctgtttccatgtatttcaaaaatgcattccagtgaaagaaatagagactcc
tcctcgccaatcgttgatccaccggatgcttacgcagcctctggcaaccagagattgctt
gaaggtacaaattgcaccacttaa
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