Populus nigra (Lombardy poplar): 133701117
Help
Entry
133701117 CDS
T10372
Name
(RefSeq) putative cyclic nucleotide-gated ion channel 7
KO
K05391
cyclic nucleotide gated channel, plant
Organism
pnz Populus nigra (Lombardy poplar)
Pathway
pnz04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
133701117
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pnz04040
]
133701117
Ion channels [BR:
pnz04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
133701117
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
Ion_trans_2
Motif
Other DBs
NCBI-GeneID:
133701117
NCBI-ProteinID:
XP_061980917
LinkDB
All DBs
Position
8:complement(19056119..19061052)
Genome browser
AA seq
738 aa
AA seq
DB search
MFDCNYKSQYIGGQKEKFVRLDDFDTLSVTSNKKGMKKLRFNLDGSNIAGHGKKNASKSL
RYGVKRGSEGMLTIGRSLRTGVTRAVFPEDLKVSEKMIFDPQDKSLLLWNRLLIISCILS
VSVDPLFFYLPVFNYRMACLGMDTNLAATITTMRTLLDVFYLIRMALQFRIAYVAPSSRV
FGRGELVIDPAQIATRYLSRYFIVDFLSVLPLPQIVVWKYLNNKKKGSAVLATKQALLII
VFLQYIPRFARFLPLGSDLKKTAGSFAESAFAGAAYYLLWYMLASHIAGAFWYLLAIERK
DTCWREACILSGKCNIDFLYCGNKALPGFHGWRRISDEVLGNKCSVSEDDNPPFNYGIYF
QAMSSDIVSSRNFVSKFFYCLWWGLQNLSTLGQGLLTSTYPLEVIFSILLAIAGLILFAL
LIGNMQTYLQSLTVRLEEMRIKRRDSEQWMHHRLLPQDLRERVRRYDQYKWLETRGVDEE
TLVQSLPKDLKRDIKRHLCLNLVRRVPLFANMDETLLDAICERLKPSLYTEETYIVREGD
PVDEMLFIIRGRLESVTTDGGRSGFFNRGVLKEGDFCGEELLTWALDPKSLGNLPSSTRT
VRALTEVEAFALEAEELKFVASQFRRLHSRQLQHTFRFYSQQWRTWASCFIQAAWRRYSR
RRAAELHRLEEEEEEVDYDEEDDDERALVEENDGSARLGATILASRFAANALRGHRLRSL
NSRALTKLQRPPEPDFSE
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
atgttcgattgtaactacaagtcacaatatattggtggccagaaggagaaatttgtaagg
ttggatgattttgatacattatcagtgacttctaataagaaaggaatgaagaaattgaga
tttaatttagatggttctaacatagctggccatggaaagaaaaatgcttcaaaatccctt
aggtatggggtgaaaagaggatcagaaggaatgttaacaattggacgatcacttagaaca
ggagttactcgtgcagtgtttccagaggaccttaaggtgtctgagaagatgatttttgat
cctcaagacaaatctcttctgttatggaataggcttttgatcatatcatgcattttatca
gtatctgttgatcctttgttcttttatcttcctgtcttcaactatcggatggcctgtctg
ggtatggatacaaatttagcagcaacaattacaactatgaggacactacttgatgttttc
tatctgattcgcatggctcttcagtttcgaatagcgtatgttgcaccatcatcaagggtt
ttcggacgaggtgaacttgtgattgatcctgcacagatagccaccagatatttaagccgt
tattttattgttgattttctctctgtgctccctctgcctcagatagtggtatggaaatat
cttaataataaaaagaagggctcggcggtgttagctactaagcaggcattgctaattatt
gtttttcttcaatacatcccaaggtttgctcgctttttgcctttggggtcagacctgaaa
aagaccgccggctccttcgctgagagtgcttttgctggtgctgcgtactatctgctttgg
tacatgcttgccagtcatatagcaggtgctttctggtatttactagccattgaacgcaaa
gatacatgctggagagaagcttgcattctaagtgggaaatgtaacatagacttcttgtat
tgtggcaacaaagcactgccaggtttccacggttggcgaaggataagtgatgaggttctt
ggaaacaaatgttctgtcagcgaagacgataatccaccatttaattatggaatctatttc
caggctatgtcatcagacattgtgtcatccaggaactttgtctccaaattcttttactgt
ttatggtggggcctgcaaaatttgagtacacttggtcagggcctactaacaagcacctat
cctttggaagttatcttttctatactattagctattgctgggcttatcctcttcgcactt
ctgattggaaatatgcagacctaccttcagtctcttactgttcgtttagaggagatgagg
attaaaaggcgtgattctgagcagtggatgcatcatcgcttgcttccgcaggatcttaga
gagcgagttaggcgctatgatcagtacaaatggttggaaactcgtggagtggatgaagag
actttggtccaaagtctaccaaaagatcttaaaagggatatcaagaggcatctctgtctg
aatttggtcagaagagtccctctatttgccaacatggatgaaacattgttggatgccatc
tgcgagagactgaagccaagtttgtatacagaagagacttacatcgtccgtgaaggggat
ccagttgacgagatgcttttcatcattcgcggacgcctggagagtgtaactacagatggt
ggaaggagtggatttttcaacagaggtgtattgaaagaaggggacttttgtggtgaggag
cttctgacttgggcactggaccctaaatctcttggtaatttgccatcatcaactaggaca
gtgagggcattgactgaggtagaggcttttgccttagaagctgaagagctgaagtttgtt
gcatctcaatttaggcgtcttcatagcaggcagttgcaacacaccttccgtttctactct
cagcaatggaggacttgggcttcctgctttatccaagctgcttggcgccggtattccagg
aggagagcagcagaacttcatcgcctagaagaagaggaggaggaggtggattacgacgaa
gaagatgacgatgaaagggcattagttgaggaaaatgatggctctgctagactaggtgca
acaatccttgcttcacgctttgctgccaatgctcttcgtggacacaggcttcgcagcttg
aattccagagccttgacgaagctgcagaggcctccagaacctgacttcagtgagtaa
DBGET
integrated database retrieval system
