Populus nigra (Lombardy poplar): 133701249
Help
Entry
133701249 CDS
T10372
Name
(RefSeq) uncharacterized protein LOC133701249 isoform X1
KO
K17925
sorting nexin-13
Organism
pnz Populus nigra (Lombardy poplar)
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
pnz04990
]
133701249
Domain-containing proteins not elsewhere classified [BR:
pnz04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
133701249
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PXA
Nexin_C
PX
Motif
Other DBs
NCBI-GeneID:
133701249
NCBI-ProteinID:
XP_061981080
LinkDB
All DBs
Position
8:complement(8010470..8018825)
Genome browser
AA seq
1139 aa
AA seq
DB search
MNARMSTQRQVIVRDIVEEAKKRIVMLVICVVGLSYLMSLTSASVWVNLPAAASLIILLR
YFSLDYEMRKKAAVYNNKPASTTSSTLSQNKSLEFTRVVEKSDWRRKVNSPVVEDAIDHF
TRRLVSEWVTDLWYSRLTPDKEGPEELVQIMNGVLGEFSSRMRNVNLIDLLTRDFINLIC
THLELFRAIQAKMEKRQSSVLTIEQRDKELRHVLAAENKLHPALFSTEAEHKVLQHLMDG
LISFTFKPADLQCSFFRYVVRELLACAVMRPVLNLASPRFINERIESVVISKANQRVAEA
QETSHFKPNGSSRISSNHFSRFLDPTDTGVELVQLKTDQCRGGPDAPEKDKVIGSHISKD
PLLYIDTQSSRTWSSLPMNSQIINEEGIQRHFSGGEWGERLDMISRRKTAVLAPENFENM
WTKGRNYRKKEGENRLIEQVPQNSSVSKYVTSDHSKRASNSKKDGVTKPDAPLAHNAQSV
GTEQSTVENPLHHTDQNMSNHPLFSSHKDGIRSLMRVDEIESGSTSSYTSEEEDANSVTG
LDSPGTKVWDGKTNRNLAVSHIHHPLENPDGHREKKTGRGLAHYQRLSRHQSGSKRSRPS
TQKVHVWQEIERKSFLSGDGQDVLSLKGHTKADDFSDDSESLDRVYSGATACSSATSVSI
PENHTSNVNSFKHSLMVDSIYKLRCEVLGANIVKSGSKTFAVYSISVTDVNNNSWSIKRR
FRHFEELHRRLKEYPEYSLHLPPKHFLSTGLDVPVIQERCKLLDIYLKKLLLLPTISGSI
EVWDFLSVDSQTYVFSNSFSIIETLSVDLDDKPSEKSKRVSNFIGPAINYLSARKEQLSA
ECKESILQTKHNLGAVGARMISKDTPRSPVKSIKESGRSLKDPGSDSDMQKNVSSARNLE
ENVRVGDSLEEMSVSIHDTASDHMLPTEWVPPNLTVPILDLVDVIFQLQDGGWIRRQAFW
VAKQILQLGMGDALDDWLIEKIQLLRRGSVVASGIKRVEQILWPDGIFITKHPKRRPPPQ
QPTEVSSPKLISPHGQQPMEVSSPRLNDEQQQQDAVRRAKFVYELMIDNAPAAVVGLVGR
KEYEQRAKDLYFFLQSSVCTKQLVFDLLELLLLTAFPELDSVFRQLREEKHKFGEFKPN
NT seq
3420 nt
NT seq
+upstream
nt +downstream
nt
atgaatgcgagaatgagcacgcaaaggcaggtgattgtacgggacatagtggaggaagcc
aagaagaggattgttatgttggttatttgtgttgttggattatcttatctcatgtcctta
acaagtgcctcagtttgggtcaacttgcctgctgctgcttccttgatcattctccttcgc
tacttttccctggattatgaaatgcgtaagaaagctgctgtatataacaacaaaccagcc
tccacaacatcaagcacactgtcacaaaacaaatctcttgaatttaccagggttgttgaa
aagtccgattggagaaggaaagtgaattcacctgttgttgaggatgcaatagatcatttc
actagacgtctagtctctgagtgggtgacagatctatggtactctcgcttaacccctgat
aaagaaggtccggaagaactggtgcagataatgaatggtgttcttggggaattttcaagt
cgcatgagaaatgtaaatcttattgatctactgacaagggattttattaatctcatctgc
acccacttggagctttttcgtgcaattcaagcaaagatggaaaagcgacagtctagtgtg
cttaccattgaacagcgagacaaggaactaagacatgtcctggctgctgagaacaaattg
caccctgctttattttctactgaagctgagcacaaggttttgcagcatctgatggatggt
ctcatttcttttacattcaagccagcagatctgcagtgctcttttttccgttatgttgtt
agggaacttcttgcttgtgcggtaatgcgaccagtgttaaacttagctagcccaaggttc
ataaacgaaaggattgaaagtgttgtcatttctaaggctaatcaaagagttgctgaagca
caagagacatctcatttcaaaccaaatgggtcttcaaggatctcatccaatcatttttcg
aggtttttagatcctactgatactggggttgaacttgtgcagttaaaaaccgaccaatgc
agaggtggaccggatgcccctgaaaaagataaagtgattggaagccatatctcaaaagat
ccattactttacattgatacccaatcttcccgcacatggagctcgctgcccatgaattcc
cagattattaatgaagaaggaatccaacgacatttttcaggaggagaatggggtgagagg
ttggatatgatatctcgcagaaagactgcagtccttgctccagaaaattttgaaaacatg
tggacaaaagggagaaactatagaaagaaagaaggggaaaatcgattgatagagcaagtc
cctcagaattcttcagtgagtaagtatgttacatcagatcattcaaagagggcatctaat
tccaagaaggatggtgtaaccaaacccgatgcccctctggcccacaacgcccagtctgtg
ggtaccgagcaatctacagtagaaaaccctctgcatcatacagatcagaatatgtcaaac
catccactatttagttcacacaaagatggcatacggagcctcatgcgtgtagatgagatt
gaatcaggtagcactagctcttatacttctgaagaggaagatgcgaacagtgtaaccgga
cttgattctccaggaactaaagtctgggatggtaaaactaacagaaacctggctgtttcc
cacattcatcatccacttgaaaatcctgatggccacagggaaaagaagactggtaggggg
cttgctcactatcaaagattatctagacaccagtctggcagtaaaaggtcaaggccaagc
actcagaaggtacatgtttggcaagagattgagagaaaaagcttcttgtctggagatgga
caggatgtacttagtttaaaaggacatactaaagctgatgatttcagtgacgattctgaa
agtttagatagagtttacagtggagcaactgcatgttcatctgcaacatctgtttctatt
cctgaaaaccacacttcaaatgttaattcttttaaacattcattaatggtggactcaatt
tataagttgagatgcgaggttttgggtgcaaatattgttaagagtggctctaaaacattt
gctgtttattccatatctgttacagatgtaaataataatagttggtcgatcaaaagaagg
tttcgacatttcgaggagttacatagacgtctcaaagagtatccggaatatagtcttcat
ttgccacctaagcattttctctctacaggcttagacgtgcctgtcatacaagagcggtgt
aaattgcttgatatatatctaaagaagctcttgctacttccaacaatttcaggatccatt
gaagtctgggactttcttagtgttgattctcagacgtatgtgttctctaattcgttttct
atcatcgaaacattatcagttgacctggatgacaagccctctgaaaagagtaaaagggtt
tcaaattttattggccctgcaatcaattacttatccgctaggaaggagcaattgagtgca
gagtgcaaggaatctatattgcagacaaagcataatcttggggcagttggggcccgaatg
atttcaaaagacacgcctcgttctccggtgaagtctattaaagaatctggaagatcattg
aaggatccaggaagtgattcagatatgcaaaagaatgtatcatctgctagaaatttagag
gagaatgtaagagtgggtgatagcttagaagagatgtctgtgtctattcatgatactgct
agtgatcacatgctccctacagagtgggtgccaccaaatttgactgttcctatacttgac
ttggtagatgtcattttccagctacaagatggtggatggatcaggaggcaggctttttgg
gtggccaaacagatactacaactaggaatgggcgatgctttagatgattggttgatagag
aaaatccagcttctgcgtaggggttcagttgttgcatcagggatcaagcgggttgagcag
atactttggcctgatggaatattcatcaccaaacatccaaagagacggccaccaccccag
caacccacggaagtgtcttctcctaaattgatttcccctcatggccagcaacccatggaa
gtctcttcacctagattgaatgatgagcagcaacaacaggatgcagttcgacgagctaaa
tttgtatatgagctgatgattgacaacgcaccagctgctgttgtgggccttgttggtcga
aaggagtatgaacaacgtgcaaaagatctctacttctttcttcagtcatcagtttgtacg
aagcaactggtttttgatctccttgagctgctgcttttgactgcatttccagaactggat
tctgttttcaggcagttgcgtgaagagaagcataaatttggcgagtttaaacccaattag
DBGET
integrated database retrieval system
