Populus nigra (Lombardy poplar): 133701271
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Entry
133701271 CDS
T10372
Name
(RefSeq) protein LATERAL ROOT PRIMORDIUM 1-like
KO
K27807
short internodes/stylish family transcription factor
Organism
pnz Populus nigra (Lombardy poplar)
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pnz03000
]
133701271
Transcription factors [BR:
pnz03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
133701271
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GFIT
Motif
Pfam:
DUF702
DUF7500
Motif
Other DBs
NCBI-GeneID:
133701271
NCBI-ProteinID:
XP_061981120
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Position
1:21568387..21570189
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AA seq
360 aa
AA seq
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MVGLRDVFVVAPAAPFNHHHHHHHHQHHEQINLSTADPINASNATALGVGVGVGVIPLLT
SAPCLTPQNMDDQDLLHNGRNKISGIHQFWQNQGTQYIKKASDTTPSIIDHHNNSSTANL
LLQSGNGGGNGSGNLGGNSSSSATTTCEDCGNQAKKDCSHRRCRTCCKSRGFDCATHVKS
TWVAAARRRERQLIATAGGGAGSTGSTSGSKKPRLINSQATTTSHTSTSNTTPPRSYDTS
SSHQDAGFKERLPVQVTAPAVFRCVRVTAVEDGEDQYAYQAVVKIGGHVFKGFLYDQGVE
TRDGFPNISELHLGAANGGGGGGGAGRHGASSSPILDPSDVYGASAGGLLGGSAFGNPIN
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atggtgggccttcgcgatgtcttcgttgtggctcctgctgctcccttcaaccaccaccac
caccaccaccaccaccagcatcatgagcaaatcaatctttcaacagcagatccaatcaat
gcttccaatgctacagctcttggtgttggggtaggtgttggtgtcattccactccttaca
tcagcgccttgtcttacgccacaaaacatggatgatcaagatttgttgcataatggtcga
aacaagattagtggaattcatcagttttggcaaaaccaaggcactcaatatatcaagaaa
gcttctgacaccaccccttcgattattgatcatcacaataattcttcaacagcgaatctt
ctactacaaagtggaaatggtggaggtaatggtagtggaaatcttggagggaattcatca
tcgtctgctacaactacgtgtgaggattgtggaaaccaagcgaagaaagattgtagccat
agaaggtgtaggacgtgttgtaaaagccgtggttttgattgtgctactcatgtgaagagc
acgtgggtagcggctgcgaggaggagagagcgtcagcttatagcaactgctggtggtggt
gctggttccactgggtctacttctggttccaagaaacctaggcttataaactctcaagct
actactacttctcatacttccacttctaatacgactcctccaaggagctatgacacgagt
tctagtcaccaagatgcaggttttaaagagagattaccggtgcaagtaactgcaccagca
gtttttaggtgtgttagagtgacagcagtggaagatggtgaagaccagtatgcgtatcag
gctgtggtgaagattggtggtcatgttttcaaagggtttctatatgaccaaggagttgaa
acaagagatgggttccctaatatatctgaattgcatttgggtgctgctaacggcggcggc
ggcggcggcggcgcagggagacatggggcctcttcttccccgattctcgatccttcagat
gtttatggtgcttctgctggagggttactaggaggttcggcctttggaaatccaataaat
taa
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