Populus nigra (Lombardy poplar): 133701428
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Entry
133701428 CDS
T10372
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 37-like
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
pnz Populus nigra (Lombardy poplar)
Brite
Enzymes [BR:
pnz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
133701428
Messenger RNA biogenesis [BR:
pnz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
133701428
mRNA cycle factors
Common to processing body (P body) and stress granule
133701428
Spliceosome [BR:
pnz03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
133701428
Chromosome and associated proteins [BR:
pnz03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
133701428
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Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
133701428
NCBI-ProteinID:
XP_061981324
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Position
8:complement(21504024..21511218)
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AA seq
625 aa
AA seq
DB search
MNTRSSWADLAANSAAESTIAGSSANNGSVGTTSGNAPTRPTYVPPHLRNRVPSSDPPAA
AYSGPASSNDRSGYGGGSRWGVPRNDYRGGYGGGGGGRGGWGNRGGWDRGREREVNPFGD
DDETEQPLSEQENSGINFDAYEDIPVETSGDNVPPPVNTFAEIDLGDALNQNIRRCKYVK
PTPVQRHAIPISLAGRDLMACAQTGSGKTAAFCFPIISGIMKMQDQSAQRPPRGARTVYP
LALILSPTRELSMQIHEEARKFSYQTGVKVVVAYGGAPIHQQLRELERGVDILVATPGRL
VDLLERARVSLQMIKYLALDEADRMLDMGFEPQIRKIVEQMDMPRPGLRQTMLFSATFPK
EIQRLASDFLSTYIFLAVGRVGSSTDLIVQRVEFVYEPDKRSHLMDLLHAQRANGVQGKQ
ALTLVFVETKKGADSLEHWLCINGFPATSIHGDRSQQEREQALRSFKTGNTPILVATDVA
ARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGNSGLATAFFNEGNASMARPLSELMQ
EANQEVPDWLSRYASRASFGGGKNRRSGGGRFGGRDFRRDSSFSRGNSDYYGGGGSGGGY
GSSAGYGSSGGYGGGYGPGVTSAWD
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atgaatacgaggagttcatgggctgatttggctgcgaattctgcagctgagagcacaata
gctggttcttctgctaacaacggaagtgttggtactacttcaggaaatgcccctactcga
cccacatacgtccctcctcatcttcgcaaccgtgtgccatcttcagatccaccagctgct
gcctatagtgggcccgcatcgagtaatgatcgttctgggtatggtggtggatctcgctgg
ggtgttccaagaaatgattaccgtggtgggtatggtggtggtggcggcgggagaggtggt
tggggaaacagaggtggttgggatcgtgggagagagagagaagtgaatccttttggagat
gatgacgaaacagagcagccactaagtgagcaagagaatagtggcattaattttgatgca
tatgaagatattccagttgagacaagtggggacaatgtgccaccacctgtaaacaccttt
gcggagattgatttgggtgatgcattgaatcagaatatccgcaggtgcaagtatgtgaag
cccacaccggtgcagcggcatgccattccaatctctcttgcaggcagggacttgatggcc
tgtgcccagactggttctgggaaaactgctgctttctgtttcccaataattagtggaatt
atgaaaatgcaagatcagagtgcacaaaggccgcctcgtggagcacgaactgtgtaccca
ctagctcttattctctctccaaccagagagctttcaatgcagatacatgaggaagctagg
aaattctcgtatcaaactggtgttaaagtggttgttgcttatggaggagcaccgattcac
caacagctgcgagaactggagagaggtgttgatattctggtggcaactccaggaagattg
gtagatctgttggagagagctagagtttcactgcagatgatcaagtatttggccttagat
gaggcagatcggatgctggatatgggttttgagcctcaaataagaaaaattgtggaacaa
atggacatgccccgacctggtttaaggcagacaatgctgttcagtgctacctttccgaaa
gagatacagagactagcctctgactttttgtcaacttatatctttctggctgttggacga
gtgggctcaagtacagatttgattgtccaaagagttgagtttgtctatgagcctgacaaa
agaagtcacctcatggatcttcttcatgcacaacgggcgaatggtgttcagggcaagcaa
gctttgacattagtttttgtggagactaagaagggtgctgattctcttgagcattggcta
tgcattaatggtttccctgctactagcatacatggtgatagatcacagcaggaaagagaa
caggcattgcgctcatttaaaactggcaatactccaatcttggtagcaaccgatgttgca
gcacgcggtcttgatatccctcatgttgcacatgtggtcaactttgatctcccaaatgac
attgatgattatgtccatcgtatagggcgtactggacgagctggaaattctggtctggcg
actgcgttcttcaatgagggcaatgcatcaatggcaaggccattatctgaactaatgcaa
gaagcaaatcaagaagtacctgattggctctctcgatatgcatctcgtgcttcttttggt
ggagggaagaaccgccgctctggcggaggtcggtttggtggccgtgactttcgaagggat
tcatctttcagtaggggcaattcagattattatggtggaggaggaagcggcggcggatat
ggctcttcagctggatacggctcttcaggtggctatggtggaggctatggccctggggtg
actagtgcctgggattaa
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