Populus nigra (Lombardy poplar): 133701475
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Entry
133701475 CDS
T10372
Name
(RefSeq) RNA polymerase II C-terminal domain phosphatase-like 3
KO
K18999
RNA polymerase II C-terminal domain phosphatase-like 3/4 [EC:
3.1.3.16
]
Organism
pnz Populus nigra (Lombardy poplar)
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pnz01009
]
133701475
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pnz03021
]
133701475
Enzymes [BR:
pnz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
133701475
Protein phosphatases and associated proteins [BR:
pnz01009
]
HAD phosphatases
Fcp/Scp phosphatases
133701475
Transcription machinery [BR:
pnz03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
133701475
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NIF
BRCT
PTCB-BRCT
LolA_like
Motif
Other DBs
NCBI-GeneID:
133701475
NCBI-ProteinID:
XP_061981387
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All DBs
Position
8:complement(17596487..17603108)
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AA seq
1274 aa
AA seq
DB search
MGKNETASAAANGSGKMEDVEEGEISDTASVEEISEDDFNKQEVVVVKETPSSTTNNNNN
SKQKVWTVRDLYKYQVGGGYMSGLYNLAWAQAVQNKPLNELFVEVEVDDSSQKSSVSSVN
SSKEDKRTVVIDDSGDEMDVVKVIDIEKEEGELEEGEIDLDSEGKSEGGMVSVDTEKRVK
SIREDLESVSVIKDDKSFEAVCLKLHNALESLKELVRVNENGFPSKDSLVRLLFTAIGAV
NSFFSSMNQKLKEQNKGVFMRFLSLVNSHDPSFFSPEHTKEIELMVSSLDSHDILSSSSA
GEERETQVSGKVNERDNDSLSKTAGYDLTTMNRLPSAAESFVHNKPNFSIEPPKPGVPSF
KSRGVLLPLLDLKKFHDEDSLPSPTRETAPSFPVQRLLPIGDGMISSGLPVPKVASFTEE
PRVHPYETDALKAVSSYQQKFNLNSFFTNELPSPTPSEESGNGDGDTAGEVSSSSTVNYR
TVNPPVSDRKSASPSPPPPPPPPPPPPPHLNNSCIRVVIPTRNSAPVSSGTSSTVKASAK
SRDPRLRYVNTDASALDQNQCTLLMVNNPPRAEPSGAIAGSRKQKIEEDVLDGTLLKRQR
NSFDNFGVVRDIRSMTGTGGWLEDTDMAEPQTVNKNQWAENAEPGQRINNGVVCPSTGSV
MSNVSCSGNVQVPVMGINTIAGSEQAPVTSTTTASLPDLLKDITVNPTMLINILKMGQQQ
RLALDGQQKLADPAKSTSHPPSSNSVLGAIPEVNAVSSLPSGILPRSAGKAQVPSQIATT
DESGKIRMKPRDPRRVLHNNALQRAGSLGSEQFKTTTLTSTTQGTKDNQNLQKQEGLAEL
KPVVPPDISSPFTKSLKNIADIVSVSQTCTTPPFVSQNVASQPVQIKSDRVDGKTGISNS
DQKMGPASSPEVVAASSLSQNTWEDVEHLFEGYDDQQKAAIQRERARRIEEQKKLFAARK
LCLVLDLDHTLLNSAKFVEVDPVHDEILRKKEEQDREKPYRHLFRFPHMGMWTKLRPGIW
NFLEKASKLYELHLYTMGNKLYATEMAKVLDPKGVLFAGRVVSRGDDGDLLDGDERVPKS
KDLEGVLGMESGVVIIDDSLRVWPHNKLNLIVVERYIYFPCSRRQFGLPGPSLLEIDHDE
RPEDGTLACSLAVIERIHQNFFTHHSLDEADVRNILASEQRKILAGCRIVFSRVFPVGEV
NPHLHPLWQSAEQFGAVCTNQIDEQVTHVVANSLGTDKVNWALSTGRFVVHPGWVEASAL
LYRRANEQDFAIKP
NT seq
3825 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaaaatgagaccgcttccgccgccgccaacggtagtggtaaaatggaagacgtg
gaagaaggggaaatatcggatacagcgtcagtggaagagatcagtgaagatgattttaat
aagcaagaagttgttgtagtgaaagaaacaccatcatccactaccaacaacaacaacaac
agcaaacagaaagtttggacggtgagagatctgtacaagtatcaagttggaggtggatac
atgtctggcttgtataatcttgcttgggcacaagctgttcaaaataagccattaaatgag
ctgtttgttgaggtggaagttgatgatagttcccagaaatcatcggtgtcttctgtgaat
agtagtaaagaagataagagaactgttgtgatcgatgatagtggtgatgagatggacgtg
gttaaagttattgatatcgagaaagaggaaggggagttagaggaaggggagattgatttg
gattcggaggggaagagtgagggaggaatggtgagcgttgatactgagaagagggtgaag
tccattcgtgaagatttggagagtgttagtgtgattaaagatgacaagtcatttgaggca
gtttgtttgaaactgcataacgcattggagagcttgaaggaactggttagggtaaatgaa
aatggttttccctcaaaagatagtcttgttcggttgctgttcactgcaattggagctgtt
aattcgttttttagctcgatgaaccaaaaattaaaggagcagaataagggcgtgttcatg
aggtttctttcccttgtaaatagccatgatccttcgtttttctctcctgagcataccaaa
gagattgagctcatggtttcctcactggattctcatgatattttgtcaagttcaagtgct
ggtgaagagagagaaacacaggtttctggtaaagtgaatgagagggataatgattcctta
tcgaaaactgcaggttacgatttgactactatgaatagattaccttctgctgctgaatct
tttgttcataataagcccaacttttcaatagaacctcctaaaccaggtgtacctagtttt
aagagtagaggagttttgcttcctttgctcgacctcaaaaaatttcatgatgaagacagt
cttccttcaccaacacgggaaacagcaccttcttttcctgttcaaagattattgcctatt
ggggatggaatgattagttctgggttgcctgtgcctaaggtggcctctttcacagaagag
cctagagtgcatccctatgaaactgatgcactcaaagctgtttcaagctatcaacaaaaa
ttcaatcttaattcttttttcactaatgaacttccaagcccaacaccttcggaagaatct
ggcaatggggatggtgatactgctggggaagtttctagttcatcaactgttaactacaga
actgtaaatccacctgtttcagatagaaaaagtgcttctccttctccaccaccaccacca
ccaccacctcctcctcctcctccccacctcaacaattcgtgcattcgtgttgttatcccc
actaggaattctgcaccagtgagttctgggactagttcaaccgtgaaagcatcagcaaag
agcagggaccctaggcttcgatatgttaataccgatgccagtgctttggaccagaaccag
tgtaccttgctgatggtgaataacccacctagagcggaaccttctggagcaatagcaggt
tcaaggaagcagaagatagaggaggatgttttggatggtactttgttgaaaaggcaaaga
aattcatttgataattttggtgttgttagggatattagaagtatgactggaactggtggc
tggttagaggacactgatatggctgaacctcaaactgtgaacaaaaatcagtgggcagag
aatgcagaacctggtcaaagaataaataatggagttgtttgtcctagtactggtagtgtt
atgtccaatgtgagttgtagtggcaatgtgcaggtgccagttatgggaattaacaccatt
gctggaagtgaacaggcaccagtgacaagcactactacagcatccctacccgatttatta
aaggacatcactgtgaatccgacaatgttgataaatatacttaagatgggacaacaacag
agattagcattagatgggcagcagaagcttgctgatcctgcaaaaagtacatcacatcct
ccaagttcaaactcggtacttggagcaattcctgaggtgaatgctgtttcctcactgccc
tcagggattttgccaagatctgcaggaaaggcccaggttccttctcaaatagctacaacg
gacgagtcaggaaaaattcgaatgaaaccacgagatcctcgtcgtgttctccataataat
gcactccagagggctgggagcttgggatccgaacaattcaaaacaacaacccttacatcc
accacccaagggactaaagataatcaaaacttgcaaaaacaagaggggctagcagaattg
aagccagttgtgccacctgatatttcctcgccatttacaaagagcttgaaaaatattgct
gatattgtatctgtttctcaaacatgtacaactccaccttttgtttctcagaatgttgca
tcccaacctgttcaaattaagtcagacagagtggatggcaaaactggaatttcaaattct
gaccagaaaatgggacctgcttcatctcctgaagtggttgcagcaagttctctttcacag
aacacttgggaagatgttgagcatctttttgaagggtatgatgaccagcaaaaagctgct
atacagagagagagagcaagaaggatagaagaacagaagaaactatttgctgcacgcaag
ctctgccttgttttggatctggatcatacacttctcaattcagccaagtttgtcgaagta
gaccctgtgcatgatgagattttgaggaaaaaagaagaacaagatcgtgaaaagccatac
agacatctctttcgctttcctcatatggggatgtggacgaaattgcgccctgggatctgg
aatttcttagaaaaggctagtaaactgtatgagctacatctttacacaatgggaaacaag
ttatatgctacagagatggctaaagtgcttgatccaaaaggggttttgtttgctggacga
gttgtctccaggggtgatgatggagatctgttggatggtgatgaaagggttcccaagagc
aaggatcttgaaggggtgttgggtatggagtcaggtgtcgttatcatagatgattcgttg
agagtgtggccccataacaaattgaacttgatagttgtagaaaggtatatttatttccct
tgcagtagacggcagtttgggcttcctggtccttctcttttggagattgaccatgatgag
agaccagaagatggaactttggcatgctctttagcggttattgagagaatacatcaaaac
tttttcacccatcattcattagatgaagcagatgtaagaaatatccttgcctcagagcag
agaaaaattttggctggctgtcgtatagtttttagtagggtgtttccagttggtgaagtc
aacccccaccttcatccactgtggcagtcagctgaacagtttggtgctgtctgcacgaac
cagatagatgaacaggttactcatgtagttgccaattcccttgggactgataaggtgaat
tgggctctttccacgggaagattcgttgtccatcctggctgggtggaagcatcagctttg
ctttatcgaagagcaaatgagcaagattttgccattaaaccataa
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