Populus nigra (Lombardy poplar): 133701611
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Entry
133701611 CDS
T10372
Name
(RefSeq) ras-related protein RHN1-like
KO
K07887
Ras-related protein Rab-5A
Organism
pnz Populus nigra (Lombardy poplar)
Pathway
pnz04144
Endocytosis
pnz04145
Phagosome
pnz04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
133701611
04145 Phagosome
133701611
04148 Efferocytosis
133701611
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pnz04131
]
133701611
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pnz04147
]
133701611
04031 GTP-binding proteins [BR:
pnz04031
]
133701611
Membrane trafficking [BR:
pnz04131
]
Endocytosis
Rab GTPases and associated proteins
Rab GTPases
133701611
Endosome - Lysosome transport
133701611
Exosome [BR:
pnz04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
133701611
Exosomal proteins of other body fluids (saliva and urine)
133701611
Exosomal proteins of colorectal cancer cells
133701611
Exosomal proteins of bladder cancer cells
133701611
GTP-binding proteins [BR:
pnz04031
]
Small (monomeric) G-proteins
Rab Family
Rab5/17/22/31 [OT]
133701611
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
GTP_EFTU
RsgA_GTPase
Gtr1_RagA
TsaE
AAA_24
Virulence_fact
AAA_16
ATPase
MMR_HSR1
AAA_5
Motif
Other DBs
NCBI-GeneID:
133701611
NCBI-ProteinID:
XP_061981568
LinkDB
All DBs
Position
8:complement(8221521..8224816)
Genome browser
AA seq
200 aa
AA seq
DB search
MARPGNKIIQAKLVLLGDMGTGKTSLVLRFVKGQFFDHQEPTIGAAFFTQILSLTEATVK
FDIWDTAGQERYHSLAPMYYRGAAAAVIVYDISSMDTFVRAKRWVQELQRQGNPKMVMAL
VANKLDLDSKREVQNEDGEQFSQENGMFFMETSAKTAQNINELFYEIAKRLAKAYPSKST
GVNLNDETESRTRNLFCCSG
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
atggcaagacctggcaacaagatcattcaagctaagctggtgcttctgggggatatggga
actgggaaaaccagtttggtattaaggtttgtaaagggccagttcttcgatcaccaggaa
ccaacaataggagcggctttttttacacagatattatcattaactgaagcaactgtgaag
tttgatatttgggatacagcagggcaagaaagataccacagcttggctcctatgtactat
cgcggtgcagcagcagctgttattgtgtatgatatttccagcatggatacatttgttagg
gccaaaaggtgggttcaagagctgcaaagacaaggaaatcctaagatggttatggcatta
gtagcaaataaattggatttggactcgaagagagaggtgcagaatgaggacggtgagcaa
ttctctcaagagaatgggatgttcttcatggaaacatctgcaaaaactgcacaaaatatt
aacgagcttttctatgaaatagctaagagattggcaaaggcttacccttcaaagtctact
ggggtgaatctgaatgatgaaaccgaaagtaggacaagaaatctattctgttgctctggt
taa
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