KEGG   Populus nigra (Lombardy poplar): 133701611
Entry
133701611         CDS       T10372                                 
Name
(RefSeq) ras-related protein RHN1-like
  KO
K07887  Ras-related protein Rab-5A
Organism
pnz  Populus nigra (Lombardy poplar)
Pathway
pnz04144  Endocytosis
pnz04145  Phagosome
pnz04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:pnz00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    133701611
   04145 Phagosome
    133701611
   04148 Efferocytosis
    133701611
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:pnz04131]
    133701611
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pnz04147]
    133701611
   04031 GTP-binding proteins [BR:pnz04031]
    133701611
Membrane trafficking [BR:pnz04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab GTPases
    133701611
 Endosome - Lysosome transport
    133701611
Exosome [BR:pnz04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   133701611
  Exosomal proteins of other body fluids (saliva and urine)
   133701611
  Exosomal proteins of colorectal cancer cells
   133701611
  Exosomal proteins of bladder cancer cells
   133701611
GTP-binding proteins [BR:pnz04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab5/17/22/31 [OT]
    133701611
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU RsgA_GTPase Gtr1_RagA TsaE AAA_24 Virulence_fact AAA_16 ATPase MMR_HSR1 AAA_5
Other DBs
NCBI-GeneID: 133701611
NCBI-ProteinID: XP_061981568
LinkDB
Position
8:complement(8221521..8224816)
AA seq 200 aa
MARPGNKIIQAKLVLLGDMGTGKTSLVLRFVKGQFFDHQEPTIGAAFFTQILSLTEATVK
FDIWDTAGQERYHSLAPMYYRGAAAAVIVYDISSMDTFVRAKRWVQELQRQGNPKMVMAL
VANKLDLDSKREVQNEDGEQFSQENGMFFMETSAKTAQNINELFYEIAKRLAKAYPSKST
GVNLNDETESRTRNLFCCSG
NT seq 603 nt   +upstreamnt  +downstreamnt
atggcaagacctggcaacaagatcattcaagctaagctggtgcttctgggggatatggga
actgggaaaaccagtttggtattaaggtttgtaaagggccagttcttcgatcaccaggaa
ccaacaataggagcggctttttttacacagatattatcattaactgaagcaactgtgaag
tttgatatttgggatacagcagggcaagaaagataccacagcttggctcctatgtactat
cgcggtgcagcagcagctgttattgtgtatgatatttccagcatggatacatttgttagg
gccaaaaggtgggttcaagagctgcaaagacaaggaaatcctaagatggttatggcatta
gtagcaaataaattggatttggactcgaagagagaggtgcagaatgaggacggtgagcaa
ttctctcaagagaatgggatgttcttcatggaaacatctgcaaaaactgcacaaaatatt
aacgagcttttctatgaaatagctaagagattggcaaaggcttacccttcaaagtctact
ggggtgaatctgaatgatgaaaccgaaagtaggacaagaaatctattctgttgctctggt
taa

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