Populus nigra (Lombardy poplar): 133701618
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Entry
133701618 CDS
T10372
Name
(RefSeq) DNA (cytosine-5)-methyltransferase CMT2-like isoform X1
KO
K00558
DNA (cytosine-5)-methyltransferase 1 [EC:
2.1.1.37
]
Organism
pnz Populus nigra (Lombardy poplar)
Pathway
pnz00270
Cysteine and methionine metabolism
pnz01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
133701618
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pnz03000
]
133701618
03032 DNA replication proteins [BR:
pnz03032
]
133701618
03036 Chromosome and associated proteins [BR:
pnz03036
]
133701618
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
pnz02048
]
133701618
Enzymes [BR:
pnz01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.37 DNA (cytosine-5-)-methyltransferase
133701618
Transcription factors [BR:
pnz03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
133701618
DNA replication proteins [BR:
pnz03032
]
Eukaryotic type
DNA Replication Termination Factors
DNA methylation enzymes
133701618
Chromosome and associated proteins [BR:
pnz03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
133701618
Prokaryotic defense system [BR:
pnz02048
]
Restriction and modification system (R-M system)
Type II R-M system
DNA methyltransferases
133701618
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_methylase
BAH
Chromo
Motif
Other DBs
NCBI-GeneID:
133701618
NCBI-ProteinID:
XP_061981579
LinkDB
All DBs
Position
8:12721135..12735303
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AA seq
1218 aa
AA seq
DB search
MKSSSSPTDSRPKLTPLQVYESTSTSRRSPRLAPPNNNVPSKTPKSNKPKTTHISLRRSP
RLEPTPASPQSVSRKKHSRNVSKTKCSARNVSVDRKIPSRSSRVGNSRMQNVAANRTVLL
DSSALRRSPRLSSADMEIVVSERNASVVLADTARLRRSPRLANGYEEVAVSKVRTFLKRK
RVSDEMSRSPRNQNGRLDVQFALVQSEKCSRFIVNEENGRNCLKVECSSKDLSKGSPVAC
SSANAKLGCCEKRGCQSVLLTISDSEVGDSGEFEAKPLLLPWHGDNESQTGMVKCDDGSS
VFEEEPLRMSPSFDFANENAVINESPIKSCKWSSALDGDGNFEVISCSSGIFDSKDACPS
KRVKICEENSVSGMSDEKLLRRSPRTNSIVVTENGENKSGKKQSPKKNSAKERSLEKASS
GKKQKEHRVNCSLIGDPVPHDEAQERWHWRYEMKSKRTKHPRLALDDDDEDKVVWNVECH
YTQADIEGRIINLGDCVYVKGEGAKNHIGSILEFFKTTDREDYFRVQWFYRAEDTVMKEA
ADFHDNKRLFYSTVMNDNPIDCIISKVTVVQISPRVHLKFHSTPASDFYFDMEYCVDYST
FRTLLTDCSLRGHELSILPFCDSRSATPSDISMENISTCGSYKAKLTLLDLFSGCGGMST
GLCLGAKVSCVDLVTSWALDSDESACQSLKLNHPETHVRNEAAEDFLELLKEWQKLCKRY
AVNDVGRTHKSRSMASSMSKQNKNSSNDDDIAPGEYEVARLVDICYGKTDKRGKRGLKFK
VHWKGYSTSEDSWEPIEGLSNCEHSIRDFVREGFKSKILPLPGDADVICGGPPCQGISGY
NRYRNVDSPLADERNIQIVVFMDIVQFLKPKYVLMENVVDILRFDKASFARYALSRLVHM
KYQARLGTVAAGCYGLPQFRLRVFLWGAHPKEKLPQFPLPSHDVIVRYWPPPEFERNTVA
YDEDQPRDDLEKATVLRDAISDLPDVTSHETREEMAYDKPPETNFQQFIRSTRNEMTGSE
LSGTRMINLLYDHRPYSLTEEDFARVCQIPKKKGANFRDLPGVVVGADNVARRDPTKEQM
LLPSGKPLVPDFALNFEGGKSRRPYARLWWDETVSTVVTFPDLHSQAVMHPEQDRVLTIR
ECARLQGFPDYYRFCGTVKQRYRQIGNAVAVPVGRALGFTLGMAFQKLSGDDPLMTLPPK
FSHSTNLQLAKSLFQKAE
NT seq
3657 nt
NT seq
+upstream
nt +downstream
nt
atgaaatcgtcatcatcaccaacggattcaagaccaaaattaacacctttgcaggtgtac
gaatccacttctacctcaagaagatctccaagattagctccaccaaacaacaatgtacct
tcaaaaacccccaaatctaacaaacccaaaacaactcacatttccctcagacgatctccg
aggcttgaacccacacctgcttctccccaaagcgtttcgaggaaaaagcacagcagaaac
gtttctaaaacgaaatgctctgctcgaaacgtttctgttgaccgcaaaatcccgtcgagg
tcctcaagggtggggaattcgcgcatgcaaaatgttgccgccaaccgaacagttttgttg
gattcttcagctttgaggaggtcgccgaggctgtcaagtgcggacatggagattgttgtt
agtgaacgaaacgcttcagttgttttggcggatacagcgcgcttgaggaggtccccgagg
ctggcaaatgggtacgaggaagttgcggtcagtaaagtgaggactttcttgaagagaaag
agagtgtctgacgagatgtcaaggtcaccgagaaatcaaaacggccgattggacgtacag
tttgccttagttcagagtgaaaaatgctcgcgcttcatagtaaacgaagagaatggaaga
aattgtttgaaagtagaatgctcgagtaaggacttatcaaagggttcacctgtagcatgc
agttcagcaaatgctaaactgggatgctgtgaaaagcgtggttgtcagtctgttttgttg
acaatttctgactctgaagtaggggattcgggagagtttgaagccaaaccgctattgctt
ccatggcatggagataatgagagtcaaactgggatggtaaaatgtgatgatggctcaagt
gtgtttgaggaggagccgttgaggatgtctccaagttttgattttgcaaatgaaaatgct
gttattaacgagtctcccataaaatcttgtaaatggtcctcggcattggatggggatggg
aattttgaagtgatatcttgttccagtgggatttttgattcgaaggatgcatgcccttct
aagagggttaaaatttgtgaagaaaattctgtttcaggaatgtcagatgaaaagctcttg
agacggtctcccaggacaaactctattgttgtgactgaaaatggggaaaacaagtcaggt
aagaagcaatctccaaagaagaattctgctaaagaacggtctttggagaaggcttcttca
gggaagaagcagaaggaacacagagttaattgttccctgattggagatcctgtcccccat
gatgaagctcaagaaaggtggcattggcgatatgaaatgaagagtaagagaaccaagcat
ccaagactcgctttagatgatgatgatgaagataaggttgtttggaatgttgaatgccat
tacactcaggctgatattgaaggtcgcatcattaatcttggagattgtgtctatgtaaag
ggtgaaggagcaaaaaatcatattggtagtatcttagagtttttcaagacaacagacagg
gaagattattttagggtccaatggttttacagagctgaggatacggtgatgaaagaagca
gctgattttcatgacaataagcggttattttattccacagtgatgaatgataatccaata
gattgcattatttctaaagtcactgttgtacagatatcacctagggtacatttaaaattt
cattcaacaccagcgtctgacttctactttgacatggaatactgtgtggattattcaaca
tttcgaactttgctgactgattgttcattaaggggacatgagttatcaatactgcctttc
tgtgattctcgttctgcaactcccagtgatatttcaatggaaaacatatccacttgtgga
agttacaaagcaaagttgacactactagatcttttctctggctgtggtggaatgtcaact
ggattatgccttggtgccaaagtttcttgtgtcgatcttgtgacgagttgggcgctagac
agtgatgagtctgcatgtcaaagcttgaagttaaatcatccggagacacatgttaggaat
gaagctgccgaggattttcttgaactattgaaggaatggcaaaagctatgcaaacggtat
gcggtcaatgatgtaggaaggacacataagtcgcggtcaatggcatcaagtatgtcaaaa
caaaataaaaattcttcaaatgatgatgatattgctcctggtgaatatgaagtcgctagg
cttgttgacatttgttatgggaagaccgataagagaggaaagcgtgggctgaaatttaag
gtgcactggaagggttatagtaccagtgaagattcatgggaaccaattgaaggcttaagt
aactgtgaacattctatacgggattttgtaagagaggggttcaaatccaagatcttgcca
cttcctggtgatgctgatgtgatttgcggaggtcctccatgccaagggattagtggctat
aatcgctatagaaatgttgattctccacttgctgatgaaagaaatattcagattgtagtc
ttcatggacatagtgcagttcttaaaacctaaatatgtgctgatggaaaatgtagttgac
atccttagatttgacaaggcttcgtttgctagatatgctttaagccgattggtgcatatg
aaataccaagcaaggcttggcaccgttgcagctggttgttatggtcttccacaatttcgg
ctgcgtgttttcttgtggggagctcatcccaaggagaaactgcctcaatttccacttcct
tctcatgatgttattgtcagatattggcctccacctgagtttgagcggaacactgttgcc
tatgatgaagatcaacctcgtgatgatctagaaaaagccacagttcttcgtgatgccatt
tcagatcttccagatgtcacaagccatgaaacccgtgaggaaatggcatacgacaagcct
ccagaaactaactttcaacaattcataaggtcaacaagaaacgagatgactggttctgag
ctcagtggaacaagaatgatcaatttgctatatgaccatcgtccttattcattaactgaa
gaagattttgctcgagtttgccaaattcctaaaaaaaagggagcaaatttcagggaccta
cctggtgtggttgtaggagctgacaatgttgcccggcgggatccaacgaaagagcaaatg
ttgttgccatccggaaagcccctggtacctgattttgccttaaattttgaaggaggaaag
tctagaaggccatatgcgagattatggtgggatgaaacagtgtcgactgttgttactttt
ccggatcttcacagccaggcggtgatgcatccagagcaagatcgagttctcaccatacga
gaatgtgctaggctgcaaggttttcctgattattatagattctgtgggacagttaaacaa
aggtatcgtcaaattggaaatgcagttgcagttcctgtaggtcgtgccttgggattcacg
ttggggatggcatttcaaaaactaagcggggatgatccgctaatgacattacctcccaag
ttctctcactcaactaaccttcaattagctaaatcactgtttcagaaggctgaataa
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integrated database retrieval system
