Populus nigra (Lombardy poplar): 133701620
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Entry
133701620 CDS
T10372
Name
(RefSeq) uncharacterized protein LOC133701620
KO
K14295
nuclear pore complex protein Nup50
Organism
pnz Populus nigra (Lombardy poplar)
Pathway
pnz03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
133701620
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pnz03019
]
133701620
Messenger RNA biogenesis [BR:
pnz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
133701620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ran_BP1
DUF6242
Motif
Other DBs
NCBI-GeneID:
133701620
NCBI-ProteinID:
XP_061981586
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Position
8:complement(14476186..14481470)
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AA seq
483 aa
AA seq
DB search
MKGAKRFAVSDSLPDSNDTALRNKRIMAGLLFDVHRPEPSQQQLTPPLDVKRAESSQHHV
RALNNQFASWVQTQLKNHPDELWEDGIQDYLAHASNIMEKFSDVVNWLKANSAKGGSVAD
SLTTEKKLVPEIKNNESKLLQEKTGFALPSTSASFTSSWSFGVFSANQSSGGVSSSSQSS
SLFSNGESSATFSNNLGSGLFSNNQSSGFFSNSQTFGLYSNNQSSGALSSGQSCGAFSNS
QTPFSINQSTGAVSNSQSLGALSNSQTPFSINQSTGAFSNSQSLGALSNSQTPFSFNQSS
AAFSESQSLGVLSNSQTPFSFGGQSSTPTTHNTADDADDGNELQQPGSPSVKKSVEKGIV
TVHEVKCKLYVKSSDPAVQDTWKDKGTGQLSIKCKEGISKGAKESKPTIVVRNDVGKVLL
NALLYPGIKTNPQKNSLVAIFHTAGDDSGNNDSVVARTFLLRMKTEEDRNKLATAIQEYA
PTS
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgaaaggagcgaaacgatttgcagtttcagactcactccctgattccaatgacacggca
ttgcggaataaaagaataatggcaggattgctatttgatgttcatagacccgaaccatcc
cagcaacaattgactccgccgttggatgtgaaacgggctgagtcatcacagcatcacgtg
agagctctcaataatcaatttgccagttgggttcaaacacaactgaagaaccatcccgat
gaactttgggaagatgggattcaagactaccttgctcatgcttcaaacattatggagaag
tttagtgatgttgtcaactggcttaaagcaaactctgcaaaaggaggatctgttgctgac
tctcttacaactgaaaagaaattagtgcctgaaataaagaataatgagagcaaattactt
caagaaaaaactggttttgctctaccaagtacaagtgcaagctttacaagttcctggagc
tttggtgtgttttctgccaaccaaagttctggaggagtatcatctagtagccaaagctct
agtttattctccaacggtgaaagttctgctacattctcgaacaatctaggttctggtttg
ttctcaaacaaccaaagctctggattcttctcaaacagtcaaacttttggactctactcc
aacaatcaaagctctggagcattatccagcggccaaagttgtggagcgttctccaacagt
caaacacctttctccattaatcaaagcactggagcagtctccaacagccaaagtttagga
gcactctccaacagtcaaacacctttctccattaatcaaagcactggagcattctccaac
agccaaagtttaggagcactctccaacagtcaaacacctttctcctttaatcaaagctct
gcagcattctctgaaagccaaagtttaggagtgctctccaacagtcaaacacctttctca
tttggaggtcaaagctccacccccacaacccataacactgcagatgatgctgatgatgga
aatgaattacagcaacctggcagtccatctgtgaagaagtctgtagagaagggtattgtt
acagtccatgaagtcaagtgcaagctctatgtgaagtcaagtgatccagcagttcaagac
acgtggaaagataaaggcacagggcagctttccatcaaatgcaaagaggggataagcaag
ggcgcaaaagaatctaaaccaacaattgttgttcgaaatgatgtgggaaaagtgttacta
aatgctttgctatatccaggaatcaagacaaatccacagaagaattcccttgttgcaata
tttcatactgcgggtgatgacagtggcaataatgatagtgttgtggcacgcactttttta
ttaaggatgaaaacagaggaggatcggaataagttagcaacagcaatccaagaatatgct
cccacatcatga
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