Populus nigra (Lombardy poplar): 133701621
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Entry
133701621 CDS
T10372
Name
(RefSeq) serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform-like isoform X1
KO
K04354
serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
pnz Populus nigra (Lombardy poplar)
Pathway
pnz03015
mRNA surveillance pathway
pnz04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
133701621
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
133701621
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pnz01009
]
133701621
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pnz03019
]
133701621
03036 Chromosome and associated proteins [BR:
pnz03036
]
133701621
Protein phosphatases and associated proteins [BR:
pnz01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
133701621
Messenger RNA biogenesis [BR:
pnz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
133701621
Chromosome and associated proteins [BR:
pnz03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
133701621
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
Beta-prop_THOC3
Beta-prop_IFT122_1st
Beta-prop_WDR5
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_RIG_2nd
WD40_WDHD1_1st
WDR55
Beta-prop_WDR3_1st
WD40_MABP1-WDR62_2nd
DUF5899
ComGF
Motif
Other DBs
NCBI-GeneID:
133701621
NCBI-ProteinID:
XP_061981587
LinkDB
All DBs
Position
8:complement(3927576..3937574)
Genome browser
AA seq
513 aa
AA seq
DB search
MNGGDEVAEAPPVPPQPLEWKFSQVFGERTAGEEVQEVDIISAIEFDRSGDHLATGDRGG
RVVLFERTDTKDHGGSRRDLERMGYPISRHPEFRYKTEFQSHEPEFDYLKSLEIEEKINK
IRWCQTTNGALFLLSTNDKTIKYWKVQEKKVKKISEMNVDPSKAIGNGSIASSSNSSIGK
QYLVNGGGKYDLPSNDFSIPPGGFPSLRLPVVVMSDETSLMASCRRVYAHAHDYHINSIS
NNSDGETFISADDLRINLWNLEISNQSFNIVDVKPANMEDLTEVITSAEFHPGHCNTLAY
SSSKGSIRLIDLRQSALCDSHAKLFEETEAPGSRSFFTEIIASISDIKFARDGRHILSRD
YMTLKLWDINMDSGPVATFQVHEHLRPKLCDLYENDSIFDKFECCLSGDGLRVATGSYSN
LFRVFGCNLESTEATTLEASKNPMRRQVQIPSRPSRSLSSITRVVRRAGAEGPGVDANGN
SFDFSTKLLHLAWHPTENSIACAAANSLYMYYA
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atgaacggtggagatgaagttgctgaagctccgcctgttccaccacagcctctggagtgg
aaattctctcaggtcttcggtgaacgaaccgccggtgaagaagtgcaagaagttgatatt
atttcagcaattgaatttgatagaagtggtgatcatcttgctaccggtgaccgtggaggc
cgtgtggttctctttgagagaactgacactaaggatcatggtggatcaagaagggatctg
gagaggatgggttacccaattagtaggcatcctgagtttcgatataaaacagaatttcag
agccatgaacctgagtttgactatctcaagagtttggaaatagaggagaaaattaacaaa
atcagatggtgccaaacaaccaatggtgctctttttctcctatctactaatgataaaacc
atcaagtattggaaggtccaagagaagaaggtgaagaaaatttctgaaatgaatgtggac
ccttctaaagctataggaaatggtagcattgccagttcaagcaattcaagtattggtaaa
caatatcttgtaaatggaggaggcaagtacgatttaccaagcaatgacttcagcattcct
cctgggggctttccatcattgcgtttaccagtggtagtgatgtccgatgagacaagcttg
atggctagttgtcgaagggtatatgctcatgctcatgattatcatattaattcaatttca
aacaacagtgatggtgaaacttttatatccgccgatgacctacgaataaatctttggaat
ttggaaattagcaatcaaagttttaatattgttgatgtcaaacctgcaaatatggaggat
cttactgaggttataacatcagcagaattccaccccggccattgcaatacgttagcatac
agcagttcaaaaggctcaatccgactcattgatttgcgacaatcagctttgtgtgactct
catgccaaattgtttgaggaaacagaggcaccaggctcgagatcattttttacagaaata
attgcctcaatctctgatattaaatttgcaagggatggaagacatatactcagtcgtgat
tacatgactcttaagttgtgggatatcaatatggattctggtccagttgcaaccttccaa
gttcatgaacatttaagaccaaagttgtgtgatttatatgaaaacgattcaatctttgat
aaattcgagtgttgtttgagtggtgatggattgcgagttgcgacaggctcctacagcaat
ctgtttcgggtatttggttgtaacctagaaagtactgaggcaacaactttggaagccagc
aaaaatccaatgaggagacaagtccagatcccttcaaggccttcaagatccctaagcagc
ataacacgtgttgtaagacgggcaggagcagaaggcccaggagttgatgcaaatggaaat
tcttttgatttctccacaaagttgttgcacttagcatggcatcctactgaaaattccatt
gcctgtgctgccgcaaacagcttgtacatgtactatgcataa
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