Populus nigra (Lombardy poplar): 133701654
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Entry
133701654 CDS
T10372
Name
(RefSeq) heat shock factor protein HSF8-like
KO
K09419
heat shock transcription factor, other eukaryote
Organism
pnz Populus nigra (Lombardy poplar)
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pnz03000
]
133701654
Transcription factors [BR:
pnz03000
]
Eukaryotic type
Helix-turn-helix
Heat shock factors
133701654
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GFIT
Motif
Pfam:
HSF_DNA-bind
TMF_TATA_bd
TMEM43
BRE1
Seadorna_VP6
APG6_N
Motif
Other DBs
NCBI-GeneID:
133701654
NCBI-ProteinID:
XP_061981640
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Position
8:12303963..12310079
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AA seq
508 aa
AA seq
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MDGTINSASGGDSSISGGGAQAVPAPMASQSNAPPPFLSKTYDMVDDPATDAVVSWSSTN
NSFVVWNPPEFARDLLPKYFKHNNFSSFVRQLNTYGFRKVDPDRWEFANEGFLRGQKHLL
RIISRRKPAHGHANQQPQQPHGQNSSVAACVEVGKFGLEEEVERLKRDKNVLMQELVRLR
QQQQSTDSQLQTMVQRLQGMEQRQQQMMSFLAKAMNSPSFLAQFVQQQNDNNRRITEANK
KRRLKQEDVPENEGSGSHDGQIVKYQPLMNEAAQAMLRQIMKMDASSKLDSYDNNLGAKD
SGSSSSHTSGVTLQEVLPTSGQSTHIPAAFGISRQGPSAPISEIQSSLQIASSEKVTASQ
FPDISMLVGAQGATSMPIPQADVIMPHVSQVSEMVPENVADIPCEDYMEPETCNDGFIDP
ASLGINGIIPIDIDNISPDPDIDALLDNSSFWDDLLVQSPEPEDIESSSVEGKANGNDVQ
PNANGWDKAQHVDQLTEQMELLTSDKKL
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atggatggaacaatcaactctgcaagcggtggcgactcctcgatcagcggcggtggggca
caagcggtgccggcgccgatggcgtcacagtcgaatgcgccgccgccatttctaagtaag
acttacgacatggtagacgatccggcgacagacgcggtggtgtcttggagttcgacgaat
aatagttttgtggtttggaatccgccggagttcgctcgcgatcttttgccgaagtatttc
aagcataataatttctccagctttgttaggcaactgaacacttacggttttcgaaaggtg
gatccagaccgttgggaatttgccaatgaaggatttttgaggggtcaaaagcacctgctt
aggattatcagtcggcgaaaacctgcccacgggcatgctaatcaacagccacaacaacca
catggacagaactcatcggttgccgcctgtgttgaggttgggaaatttgggctcgaggaa
gaggtggagaggcttaagagggacaagaatgtccttatgcaagaacttgttaggttgagg
cagcagcaacagtccacagatagccagttgcaaaccatggtacagcgacttcaaggaatg
gagcagcgtcagcaacagatgatgtcattcctggccaaggcgatgaacagcccgagcttc
ttggctcagtttgtacagcagcaaaatgacaacaataggcgcataactgaagccaataaa
aaacgaaggctcaagcaggaggatgttcctgagaatgagggttctggttctcatgatggg
cagattgtgaagtatcagcctctgatgaatgaggcagcccaagcaatgctcaggcagatt
atgaaaatggatgcttcttctaagttggattcttatgacaataatcttggtgcaaaagac
agtggaagctcttcgagccacacatcaggagtgactcttcaagaggttctgccaacttca
gggcaatccactcatataccagcagcttttgggatttccaggcagggcccatcggcacca
atatctgaaatacaatcttccctgcaaattgctagttctgaaaaggttacagcttctcag
tttccagatataagtatgctggttggagcacagggggcaacctccatgcctattcctcag
gcagacgtgatcatgccccatgtttctcaagtgtctgaaatggtaccagaaaatgttgct
gatatcccttgtgaagattacatggaaccagagacatgcaatgatggattcatagatcca
gcttcattaggaattaatggaataatacccatagatattgacaacatctcccctgatcct
gatattgatgctttgcttgataattctagcttttgggatgaccttcttgtgcagagtcca
gagcctgaggatattgaatcaagttctgtagagggtaaagccaatggaaatgatgtgcag
ccaaatgcaaacgggtgggacaaagctcagcatgtggatcagctgacagaacaaatggag
cttctgacatcagacaagaagctttaa
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