Populus nigra (Lombardy poplar): 133701679
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Entry
133701679 CDS
T10372
Name
(RefSeq) RGG repeats nuclear RNA binding protein A-like
KO
K13199
plasminogen activator inhibitor 1 RNA-binding protein
Organism
pnz Populus nigra (Lombardy poplar)
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pnz03041
]
133701679
Spliceosome [BR:
pnz03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
133701679
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HABP4_PAI-RBP1
Stm1_N
Motif
Other DBs
NCBI-GeneID:
133701679
NCBI-ProteinID:
XP_061981682
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All DBs
Position
8:11036492..11040591
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AA seq
362 aa
AA seq
DB search
MATANPFYILGDDDNNEDLSQLVAAAQLKAAEKPKKVDKLAAPTSQPAKLPTRPAPPAQA
VREAKNEGGLGGGRGEGRGRGRGRGGSGGFNRDSNNNETSFTGNGFSGRSRPSEDGEAAE
RRGYGAPRGGFRGSRRGGYSNGEDREGERPRRLYERHSGTGRGNEIKREGSGRGNWGTPT
DEIAPETEDPVVDNEKNVITEKQQGEEDAADANKDTAEKEPEEKEPEEKEMTLEEYEKVL
EEKRKALLDLKTEERKVGLDKDLQCMQQLSSKKSNDEIFIKLGSEKDKRKDAADKEDRAK
KAVSINEFLKPAEGERSYNPGRGGRGRGRGRGAYGSGYGSNARDVAAPSIEDPGQFPSLG
GK
NT seq
1089 nt
NT seq
+upstream
nt +downstream
nt
atggcaaccgcgaaccctttttatatccttggtgatgatgacaacaatgaggacctttct
cagctcgttgccgcggctcagcttaaggcagctgagaagcccaagaaggttgataagcta
gctgctcctacttctcagcctgccaaactccccaccaggcctgctccccctgctcaagct
gtgagggaagcaaagaatgaaggtggccttggaggtggccgtggagaaggacgtgggcgt
gggcgtggtcgcggtggcagtggtggatttaacagagattcaaataacaatgaaacttcc
ttcactggcaatggattctctggacgatccagaccatctgaagatggggaggctgccgag
agacgcggatatggtgcacctcgtggtggtttccgtggcagtcgccgtggcggttatagc
aacggggaagatagagaaggtgaacgcccccgaaggttgtatgaacgtcacagcggcact
ggtcgcgggaatgagattaagcgtgaagggtccggccgtggtaactggggaactcctact
gatgaaattgctccggagactgaagatcctgttgttgacaatgagaagaatgtcataact
gagaagcagcaaggagaggaggatgctgcagatgccaataaggacactgctgagaaagag
ccagaagagaaggagccagaagagaaggagatgacattagaagagtatgagaaggttctt
gaagaaaaaaggaaggctctgcttgatctgaagaccgaggagaggaaagttggcttggac
aaagacttacagtgcatgcaacagctctcaagtaagaagagcaacgatgaaatctttatc
aaactgggttctgagaaggacaaacgaaaagatgctgctgacaaagaagacagagccaag
aaggctgtcagtataaatgagttcctgaagcctgctgaaggggagaggtcctacaaccct
ggtcgtggtggtcgaggccgtggccgtggaaggggtgcatatggaagcggctatggaagc
aatgctcgtgatgtggcagccccctctattgaagaccctgggcagttcccctccttgggt
ggcaagtga
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