KEGG   Populus nigra (Lombardy poplar): 133701681
Entry
133701681         CDS       T10372                                 
Name
(RefSeq) coatomer subunit beta'-2 isoform X1
  KO
K17302  coatomer subunit beta'
Organism
pnz  Populus nigra (Lombardy poplar)
Brite
KEGG Orthology (KO) [BR:pnz00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:pnz04131]
    133701681
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pnz04147]
    133701681
Membrane trafficking [BR:pnz04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Retrieval pathways
   Coat protein complex I (COP-I)
    133701681
Exosome [BR:pnz04147]
 Exosomal proteins
  Exosomal proteins of colorectal cancer cells
   133701681
SSDB
Motif
Pfam: B-prop_COPA_B_2nd TPR_COPA_B WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 WDR55 Beta-prop_EML Beta-prop_WDR75_1st WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd EIF3I Beta-prop_TEP1_2nd Beta-prop_EIPR1 Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_C WD40_MABP1-WDR62_1st Beta-prop_RIG_2nd Beta-prop_SCAP ANAPC4_WD40 Beta-prop_IFT140_1st Beta-prop_HPS5 Beta-prop_WDR19_1st NBCH_WD40 WDR90_beta-prop_4th PEP5_VPS11_N Beta-prop_SPT8 Beta-prop_IFT122_1st Beta-prop_DCAF4 WD40_RFWD3 WD40_like Beta-prop_Nup120_160 Beta-prop_WDR35_TULP_N WD_LRWD1 TPR_GEMI5 TPR_8 TPR_CcmH_CycH TPR_2 HEAT_GCN1
Other DBs
NCBI-GeneID: 133701681
NCBI-ProteinID: XP_061981684
LinkDB
Position
8:8381644..8392478
AA seq 911 aa
MPLRLEIKRKLAQRSERVKSVDLHPTEPWILVSLYSGTVCIWNYQSQTMAKSFEVTELPV
RSAKFIARKQWVVAGADDMHIRVYNYNTMDKIKVFEAHTDYIRCVAVHPTLPYVLSSSDD
MLIKLWDWEKGWACTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFT
LDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPE
LPIIITGSEDGTVRIWHSTTYRLENTLNYGLERVWAVGYMKGSRRVVIGYDEGTIMVKIG
REEPVASMDNSGKIIWAKHNEIQTVNIKSVGADFEVTDGERLPLAVKELGTCDLYPQSLK
HNPNGRFVVVCGDGEYIIYTALAWRNRSFGSALEFVWSSDGEYAVRESTSKIKIFSKNFQ
EKKSVRPTFSAERIYGGTLLAMCSNDFICFYDWAECRLIRRIDVTVKNLYWADSGDLVAI
ASDASFYILKYNRDIVSSYLDSGKPVDEQGVEDAFELLHETNERVRTGLWVGDCFIYNNS
SWRLNYCVGGEVTTMYHLDHPMYLLGYLASQSRVYLIDKEFNVTGYTLLLSLIEYKTLVM
RGDLERASELLPSIPKEHHNSVAHFLESRGMIEDALEVATDPDYRFELAIQLGRLEVAKE
IAIEVQSESKWKQLGELAMSNGKLEMAEECMKHATDLSGLLLLYSSLGDAEGISKLGSLA
IEQGKINVAFLCLFMLGKVEDCLQLLVERNRIPEAALMARSYLPSKVSEIVALWRKDLNK
VNPKAAESLADPEEYPNMFDDWQVALSVESRAAETRGVYPPAEDYQTHADKPHITLVEAF
RNMQIEEEEPLENGDFDHEAEEENGDEQNGEEGSQEEAVVVDAESTDGAVLVNGNEPEEE
WGTNNEGTPSA
NT seq 2736 nt   +upstreamnt  +downstreamnt
atgcctctcagactcgaaatcaagaggaaacttgctcaaagatcggagagagtaaagtca
gtcgatctacatccaacagaaccatggattctagtgagtttgtattcagggactgtgtgt
atttggaactaccagtcacagaccatggcgaagtcttttgaggtcactgagttgccagtt
aggtcagccaagttcatagcacgaaagcagtgggttgttgctggagctgatgacatgcat
attcgtgtgtacaactacaacacaatggataagattaaagtttttgaggctcatacagat
tacattagatgtgtggccgtccatcctacccttccctatgtgttgtcatcatctgatgac
atgcttataaaactttgggactgggagaagggatgggcttgtactcagatatttgaggga
cattcccattatgtgatgcaagttacttttaatcctaaagacaccaacacttttgcaagt
gcatcccttgatcgcaccataaagatttggaatcttggctctcccgacccaaattttact
ctggatgcccaccagaaaggagtaaattgtgttgattactttacaggtggagataaacct
tatttaatcactggctctgatgatcacactgcgaaggtatgggattatcaaacgaaaagc
tgtgtccagaccttagaaggccacacacacaatgtctctgctgtatgttttcatcctgaa
cttccaataataattacaggttctgaagatgggactgttcgtatatggcattcaacaact
tacaggcttgagaacaccttgaattatggcttggaacgagtgtgggctgttggatacatg
aaaggttcacgccgtgttgtgattgggtatgatgaaggaaccattatggtcaagatcggc
cgagaagaacctgtggctagcatggacaatagtggaaagattatatgggcaaagcacaat
gaaattcaaactgtgaacattaagagtgtgggggcagattttgaggtgactgatggtgaa
agattgcctttggctgttaaggagttgggaacatgtgatctttacccccaaagcttaaaa
cacaatcccaatgggaggtttgttgttgtttgtggagatggtgagtacatcatatataca
gctttagcatggagaaacagatcatttggttctgcacttgaatttgtttggtcttcggat
ggtgaatatgctgttagagaaagtacatcaaagattaagattttcagcaaaaatttccag
gaaaagaagagtgtccggccaaccttttcagctgagcgtatttatggaggaaccctgttg
gccatgtgctcaaatgattttatttgtttctatgactgggctgaatgcaggttgattagg
agaattgatgttactgtgaaaaatctctattgggctgatagtggagatttagtggccatt
gctagtgatgcatcattctacatcctcaaatacaatcgtgacatagtttcatcttattta
gatagtggaaaacctgtggatgaacaaggtgttgaggatgcatttgagcttctccatgaa
accaatgaacgtgtcagaactggcttatgggttggggattgtttcatatacaataactcc
tcctggaggctcaattactgtgttggaggcgaggtgaccaccatgtatcatttggaccac
cccatgtacttgcttgggtaccttgctagtcaaagtcgggtgtatttgatagacaaagaa
ttcaatgtcacggggtacactttacttcttagcttaattgagtacaagactctggtgatg
cggggagatctggagagggccagtgaactcttaccttcaattcctaaagaacatcataat
agtgtggcacatttcttggaatcacgaggtatgatagaggatgctctggaagtagccact
gaccctgattatagatttgagctagctatacagcttggtagattagaggttgcaaaggaa
attgccattgaagtgcagagtgagtcaaaatggaaacagttgggagagttagctatgtcc
aatggaaagttggaaatggctgaggaatgcatgaagcacgcaacagacttgagtggtttg
ctgctgctgtattcttccttaggagatgctgaagggatatcaaagcttggatccctggca
atagaacaggggaagattaatgttgcattcctttgtttattcatgttgggcaaagttgaa
gactgcctccagctgttggtggaacgcaatcggatacctgaggctgctttgatggcacga
tcttatcttcccagcaaggtttcagagattgtggcgctttggaggaaagacctgaacaag
gttaatccaaaagctgctgaatctctggctgatcctgaagaatatccaaatatgttcgat
gattggcaagttgctttatctgttgaatctagagctgcagaaacaaggggcgtgtatcct
cctgcagaggactaccaaacacatgctgataaacctcacatcacccttgtggaggctttc
agaaacatgcaaatagaagaggaggaacctcttgaaaatggagactttgatcatgaggct
gaagaagagaatggagatgaacagaatggcgaagaagggagccaagaggaagcagttgtg
gtggatgcagagtccacggatggtgctgtactcgttaatggaaacgagcctgaggaagag
tggggtacgaataatgaaggaaccccgtcagcctaa

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