Populus nigra (Lombardy poplar): 133701694
Help
Entry
133701694 CDS
T10372
Name
(RefSeq) serine/arginine-rich splicing factor SC35 isoform X1
KO
K12891
serine/arginine-rich splicing factor 2/8
Organism
pnz Populus nigra (Lombardy poplar)
Pathway
pnz03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
133701694
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pnz03041
]
133701694
Spliceosome [BR:
pnz03041
]
Common components
Common spliceosomal components
SR proteins
133701694
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_Nup35
Motif
Other DBs
NCBI-GeneID:
133701694
NCBI-ProteinID:
XP_061981702
LinkDB
All DBs
Position
8:complement(2253193..2256483)
Genome browser
AA seq
258 aa
AA seq
DB search
MSHFGRSGPPDIADTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGESRGFA
FVRYKYADEAQKAVERLDGRVVDGREITVQFAKYGPKAERIHKGRIVETPSKSRHRSRSR
SPRRRYRDDSRDRDSRKRSRSRSRDRDRSDRDRYRAKDKDYRRRSRSRSASPDYSRGRGR
SRYDDERRSSSRSRDSLSPRRSLEPRRSFSPRKNSPVKGESPDRRSRDGGSPTPRSASPR
GRPAASRSPSPRNSDVDE
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
atgtctcacttcggcaggtctggccctccagacatcgccgacacatactctcttctcgtc
ctcaacatcaccttccgtactactgctgatgatctgtttccgctattcgacaagtacggc
aaggttgttgacatcttcatccctagagatcgaagaactggggaatcgaggggctttgca
tttgtgcgctacaaatacgctgatgaagctcagaaggcagtggaaaggctagatgggagg
gttgttgatggtcgcgaaataacagttcagtttgcaaaatatgggcccaaggctgagagg
attcataagggaaggattgttgaaacgccttcaaaatcaaggcacaggtccagaagtcgc
agccctcggagaaggtaccgagatgactctagagatagggactctaggaagagaagtagg
agcagaagcagggacagggacaggtctgaccgtgacaggtaccgtgcaaaggacaaagat
tatcgtagacggagcaggagtcgcagtgccagtcctgattactccagaggacgtggtaga
agccgttatgatgatgagcggcgaagtagcagccgatctagggacagtctctcccctcgg
cggagcctggaacctcgaaggagtttttccccacgtaagaattcccctgtgaaaggtgaa
agccctgatagacgcagccgtgatggtgggtctccaacccctcgaagtgcttctccacga
ggtcggcctgctgcgtctcgtagcccatcccctcgaaattcagatgttgatgaatga
DBGET
integrated database retrieval system
