Populus nigra (Lombardy poplar): 133701824
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Entry
133701824 CDS
T10372
Name
(RefSeq) chaperonin 60 subunit beta 2, chloroplastic-like
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
pnz Populus nigra (Lombardy poplar)
Pathway
pnz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
133701824
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pnz03019
]
133701824
03110 Chaperones and folding catalysts [BR:
pnz03110
]
133701824
03029 Mitochondrial biogenesis [BR:
pnz03029
]
133701824
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pnz04147
]
133701824
Enzymes [BR:
pnz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
133701824
Messenger RNA biogenesis [BR:
pnz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
133701824
Chaperones and folding catalysts [BR:
pnz03110
]
Heat shock proteins
HSP60 / Chaperonin
133701824
Mitochondrial biogenesis [BR:
pnz03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
133701824
Exosome [BR:
pnz04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
133701824
Exosomal proteins of other body fluids (saliva and urine)
133701824
Exosomal proteins of breast cancer cells
133701824
Exosomal proteins of colorectal cancer cells
133701824
Exosomal proteins of bladder cancer cells
133701824
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
KH_PARP14_2
Antitox_halo
Motif
Other DBs
NCBI-GeneID:
133701824
NCBI-ProteinID:
XP_061981919
LinkDB
All DBs
Position
8:complement(21789186..21793638)
Genome browser
AA seq
607 aa
AA seq
DB search
MASTFTAMSSVGTLAAPNGRVMDKKFVFSSNKLSSFASISASRFGRPQNVVLPRSSSLKV
NAAKELHFNKDGSAIKKLQTGVNKLADLVGVTLGPKGRNVVLESKYGSPKIVNDGVTVAK
EVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITR
GIEKTTRALVNELKLMSKEVEDSELADVAAVSAGNNYEVGNMIAEAMSKVGRKGVVTLEE
GKSADNSLYVVEGMQFDRGYISPYFVTDSEKMSVEYENCKLLLVDKKITNARDLISILED
AIRAGYPVLIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGT
VVREEVGLALDKVGKEVLGQASKVVLTKDTTTIVGDGSTQEAVNKRVAQIRNLIEAAEQD
YEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEGIVVGGGCTL
LRLASKVDAIKDSLENDEEKVGADIVKRALSYPLKLIAKNAGVNGSVVSEKVLSTDNPKF
GFNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPESVPAGNPM
DNSGYGY
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atggcatcgacttttacggccatgtcctcggttggaaccttggctgctcccaatggccgt
gttatggataagaagtttgtattttcttcaaacaagttgtcatctttcgcttccatttct
gcaagtcgatttggtaggccacagaatgtagttctaccaagatcaagttctctcaaggtt
aatgctgccaaggagctgcacttcaacaaggacggttctgcaattaagaaattgcaaact
ggtgtgaacaagcttgcagatttagttggggttacccttggacctaaaggccggaatgtt
gttcttgagagcaaatacggttcgcctaaaattgttaatgatggcgtgactgttgctaaa
gaggttgaattagaggatccggttgagaatattggtgctaagttagtgagacaagctgct
gccaagacaaatgacttggctggtgatgggactacaacatctgttgttcttgcgcaaggc
cttattgcagaaggtgtcaaggttgtggctgctggtgcaaaccctgttttaatcactaga
ggcattgagaagaccacaagagctcttgtaaacgaacttaagttgatgtcgaaagaggtt
gaagacagtgaacttgcagatgtggcagctgttagtgctgggaacaactatgaagttggg
aatatgatagctgaagctatgagcaaagtcggtcggaagggagtggtcacccttgaagag
ggaaagagtgctgataacagcctctatgttgttgagggaatgcagtttgaccgtggttat
atctcaccttactttgtcactgatagtgaaaaaatgtcagttgaatatgagaactgcaag
ttgcttcttgtggacaagaaaataacaaacgcaagagatctaatctccattttggaagat
gcaattagagctggatatccagttttgataattgctgaagacattgaacaagaagcttta
gcaactcttgttgtcaataagcttaggggtgctttgaagattgctgccctcaaagctcct
ggttttggggaacggaaaagtcagtaccttgatgacattgctattctgactggaggaact
gttgtcagagaagaggtggggcttgccttggacaaagtaggcaaagaggtcttgggacaa
gcttctaaagtggttcttaccaaggacacaaccaccattgttggtgacggaagcacccaa
gaagcagtaaataagagagttgctcaaattagaaatcttatcgaggctgctgaacaagac
tatgaaagggagaaactcaatgaaagaattgctaagctgtccggcggtgttgcagtgata
caggttggagcacaaaccgagacagagcttaaagaaaagaaactgagagttgaagatgct
cttaatgcaaccaaggcagccgttgaggaaggtattgtggttggtggtgggtgcaccctg
ctgagactggcatcaaaggtggatgctatcaaggatagtcttgagaacgatgaagaaaag
gtgggagcagacattgtaaagagagctctgagctaccccctgaagttaattgccaaaaat
gctggtgttaatggaagtgtggtcagcgagaaggtgctctcaactgacaatcctaaattt
ggattcaatgctgcaactggaaattatgaagatctgatggctgctggaatcattgatcca
acaaaggtggtcagatgttgcctggagcatgcatcatcggtagcaaagacgttcttgatg
tccgactgtgtagttgttgagattaaggagcctgaatcagtgcctgctggcaaccccatg
gataactcaggatatgggtactag
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