Populus nigra (Lombardy poplar): 133701828
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Entry
133701828 CDS
T10372
Name
(RefSeq) glycine--tRNA ligase, mitochondrial 1-like
KO
K01880
glycyl-tRNA synthetase [EC:
6.1.1.14
]
Organism
pnz Populus nigra (Lombardy poplar)
Pathway
pnz00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
133701828
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pnz01007
]
133701828
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pnz03016
]
133701828
03029 Mitochondrial biogenesis [BR:
pnz03029
]
133701828
Enzymes [BR:
pnz01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.14 glycine---tRNA ligase
133701828
Amino acid related enzymes [BR:
pnz01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
133701828
Transfer RNA biogenesis [BR:
pnz03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
133701828
Mitochondrial biogenesis [BR:
pnz03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
133701828
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HGTP_anticodon
tRNA-synt_2b
WHEP-TRS
Motif
Other DBs
NCBI-GeneID:
133701828
NCBI-ProteinID:
XP_061981926
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All DBs
Position
8:complement(17417591..17422097)
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AA seq
732 aa
AA seq
DB search
MRILISLVSSSALIDLLSFSRRLHTKISPFSTLIHHKPSPAMAASEDSLRRALAEKQSSI
ESQGNTVRALKASNAEKATVDEAIEKLNALKLDKSVMEKQLQATVNGNGPDGSVNKEAFR
QAVVNTLERRLFYIPSFKIYRGVAGLYDYGPPGCAVKSNVLSFWRQHFVLEENMLEVDCP
CVTPEVVLKASGHVDKFTDLMVKDEKTGTCYRADHLLKDFCNEKIQKDLSISAEKAAELK
HVLAILDDLSAEDLGAKIKEYGITAPDTKNPLSDPYPFNLMFQTSIGPSGLSPGYMRPET
AQGIFVNFKDLYYYNGNKLPFAAAQIGQAFRNEISPRQGLLRVREFTLAEIEHFVDPECK
SHPKYSEVADLEFLMFPRELQISAQSAKKIQLGEAVSKGIVNNETLGYFIGRVYLFLTRL
GIDKDRLRFRQHLANEMAHYAADCWDAEIESSYGWIECVGIADRSAYDLHAHSEKSGVPL
VAHEKFSEPKEVEKLVIAPVKKELGLAFKGNQKKVVEALEAMNEKEALDMKASLETKGEV
EFYVCTLGENVTIKKNMVSISKEKKKEHQRTFTPSVIEPSFGIGRIIYCLYEHSFYMRPS
KAGDEQLNVFRFPPLVAPIKCTVFPLVQNQQYEDVAKIISKSLTAAGISHKIDITGTSIG
KRYARTDELGVPFAITVDSISSVTIRERDSKDQIRVDVEEAAPVVKSVTDGHKTWADVWA
NFPHHSSGSVED
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atgcgcattctcatttctctggtttcctcgtcagctctaatcgatttactctctttctct
cgccgcctacacaccaaaatatcccctttctcaaccctaatccaccacaaaccttcacca
gccatggccgcctccgaggactcgcttcgacgcgctctcgccgagaaacaatcctcgatc
gaatctcaaggcaacactgtccgcgcactcaaagcctctaatgctgaaaaggctaccgtc
gacgaggcaattgaaaaattgaacgcgttgaaactagacaagtccgtgatggagaaacaa
cttcaagctaccgttaacggtaacggtcctgatggttctgttaataaggaagcattccgt
caagctgtggtaaatacacttgaacggaggttgttttatatcccttcttttaagatttat
cgtggtgtcgctgggctttatgattacgggcctcctggttgcgccgtcaagtctaatgtt
ctttctttttggcgccagcattttgttcttgaggagaatatgttggaggttgattgccca
tgtgtgacgcctgaggttgtccttaaagcatctggtcacgtggataaattcacggacctt
atggtcaaggatgaaaaaactgggacttgctatcgtgcggatcacttgcttaaggacttt
tgtaatgagaagattcagaaagatcttagcataagtgcagagaaggctgcagaactgaaa
catgtacttgctatcctggatgatctctctgctgaagatctgggggcgaagatcaaggag
tatggtattacagcaccagacacgaagaatccactttccgatccttatccattcaacttg
atgtttcaaacatcaatcggtccttctggtttgagccctgggtatatgcgccctgaaaca
gctcagggcatatttgttaattttaaggatttgtactattacaatgggaacaagctcccc
tttgctgctgctcaaattggtcaggctttcagaaatgagatttctccccgccaaggcctt
ttaagagtccgtgaattcacattagcagagattgagcactttgttgatcctgagtgcaaa
tctcacccaaaatactctgaagttgcagatcttgaattcctgatgttcccaagagaacta
caaatctctgcccagtctgcaaagaaaattcagcttggtgaagctgtttctaagggaatt
gtcaacaatgaaactctcggctatttcattgggagagtgtatcttttcctaactcgtctt
ggtatagacaaagaccgattgcgattccggcagcatcttgcaaatgaaatggcccactat
gccgcagactgttgggatgctgagattgagtcttcatatggttggattgagtgtgttggt
attgcagatagatctgcatatgacttgcatgctcactcggaaaaaagtggagttcctctt
gtagcccacgaaaaattttcagaaccgaaggaggtggagaaattggttatagcaccagtg
aagaaagagctggggcttgcttttaagggtaaccaaaaaaaggtggttgaagctttggag
gcaatgaacgaaaaagaagctttggacatgaaggcctctctggaaaccaaaggagaggta
gaattttatgtttgcactcttggggaaaatgtaacaattaagaagaacatggtatcaatt
tcaaaggagaagaagaaggaacaccaaagaactttcacaccatcagtaatcgaaccatct
tttggcattgggcgtataatctattgtctctacgagcactctttctacatgaggcccagt
aaagctggggatgagcagctgaatgttttccgttttcctcctcttgtggcacctataaag
tgcactgtgtttccactcgtccagaatcagcagtatgaggatgttgccaaaatcatttct
aagtcattgactgctgctggaatctctcataagattgatattacaggtacctcaattggt
aaacgatatgcaagaacagatgaactgggggttccctttgcgataacagttgattcaata
tcctctgtgacaatcagggagagggatagcaaggatcaaatccgtgttgatgtggaagaa
gcggcaccagttgtgaagtcggtaactgatggacacaagacatgggctgatgtgtgggct
aatttccctcatcactcctctggatctgtagaggattag
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