KEGG   Populus nigra (Lombardy poplar): 133701903
Entry
133701903         CDS       T10372                                 
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1-like
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
pnz  Populus nigra (Lombardy poplar)
Pathway
pnz03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pnz00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    133701903
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pnz03019]
    133701903
   03041 Spliceosome [BR:pnz03041]
    133701903
Messenger RNA biogenesis [BR:pnz03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     133701903
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     133701903
Spliceosome [BR:pnz03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    133701903
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_PARP14_3 Nup35_RRM_2
Other DBs
NCBI-GeneID: 133701903
NCBI-ProteinID: XP_061982063
LinkDB
Position
8:complement(4656731..4659964)
AA seq 418 aa
MSMDYDYPPPERQYGDNVLAFNRHSDEEHQQQQQQEGFYEEEQQQQEGDIGSGGIERNLS
MNHHHHHHHNRDSSSAGKLFVGGVSWETTEETFTNYFSKYGEVMDSVIMTDRHSGRPRGF
GFVTFADPAVADRVLEEDHVIDGRAVEVKRTVPREDMDVKGVTRTKKIFVGGIPPSLTED
ELKEYFSVYGSIVDHQIMLDHKTGRSRGFGFVTFDIEDAVEQIFSEGRTHELGGKQVEIK
KAEPKRTGGDYGSTAKSYTGFGNGAGGFGAGNGAGGFGASNSSVGRYGRKMGRGYDGYSG
YDGYGSYGSYGGNYPAGTAGFYGGYGAYGYGFGFGGPMMYGTGVYGGSGYGIPSGYNNAA
EYGGGKAYGRTGDGDGFGSGKRYDNGDALGGGYGSNKGYAGSANGGAAVTGRYHPYRK
NT seq 1257 nt   +upstreamnt  +downstreamnt
atgtcaatggattatgattatccaccgccagagaggcaatatggagataacgtccttgcc
tttaaccgccatagtgacgaagagcatcagcagcagcagcagcaagaaggtttttatgag
gaagaacagcaacagcaggagggggacataggtagtggaggaattgaaagaaacctatca
atgaatcatcatcatcatcatcatcacaatcgtgactcttcttctgcaggaaaactcttt
gttggtggtgtctcctgggaaactactgaagaaacgttcactaattactttagcaagtat
ggagaagtcatggactctgtaataatgactgatagacattctggaaggccacgagggttt
gggtttgtaacatttgctgaccctgcagttgctgatagggttttggaggaagaccatgtt
atagatggcagagcggtggaagtgaagaggacagttccaagggaagatatggacgttaaa
ggagtaacaagaacaaagaaaatttttgttggtggaataccaccttctttgactgaagat
gagttaaaggaatacttctctgtttatggtagcattgtagaccaccagattatgctagat
cataagactggaaggtctaggggatttgggtttgtcacatttgacattgaagatgctgta
gaacaaatcttttcagagggcagaacacatgagcttggtggtaaacaggtggaaataaag
aaggctgaaccaaagagaactggtggtgattatggcagtacagcaaagtcttatactgga
ttcggcaatggtgcaggtggctttggtgctggcaatggtgcaggtggctttggtgctagt
aatagttctgtaggtcgttatggtcgaaaaatgggcagaggatatgatgggtatagtggc
tatgatggttatgggagttatggcagttatggaggaaactaccctgcaggcactgctggt
ttttatggtggttatggtgcatatggttatggtttcgggtttggtgggccaatgatgtat
ggaactggtgtctatggaggaagtggttatggcattccaagtggttacaataatgctgcc
gagtatggtggtggtaaagcatatgggagaactggtgatggtgatggttttggcagcggt
aaaaggtatgacaatggtgatgctcttggtggtggctatggtagtaataaggggtatgct
ggcagtgcaaatggtggtgctgctgttactggaaggtatcatccttaccgtaagtaa

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