KEGG   Populus nigra (Lombardy poplar): 133701905
Entry
133701905         CDS       T10372                                 
Name
(RefSeq) MMS19 nucleotide excision repair protein homolog isoform X1
  KO
K15075  DNA repair/transcription protein MET18/MMS19
Organism
pnz  Populus nigra (Lombardy poplar)
Brite
KEGG Orthology (KO) [BR:pnz00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:pnz03036]
    133701905
   03400 DNA repair and recombination proteins [BR:pnz03400]
    133701905
Chromosome and associated proteins [BR:pnz03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    133701905
DNA repair and recombination proteins [BR:pnz03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     133701905
SSDB
Motif
Pfam: MMS19_N MMS19_C
Other DBs
NCBI-GeneID: 133701905
NCBI-ProteinID: XP_061982069
LinkDB
Position
8:7375985..7392035
AA seq 1147 aa
MAEPSQLTQHIESFVDSSCSSTQQAASLDAIVSFVKNDVVTISSLVREMEMYLTTTDSII
RARGILLLGEALKCLSSKPLDAATIHSLMSFFKERLADWRALRGALVGCLALVKRKSGGM
VTSSDAKGVAESFLQNLQVQSLGQHDRKLCFELMECLLEYYPHAVASLGDDLIYGICEAI
DGEKDPQCLMLAFHIMEVLVQVFPDPCGPIESFASDLFGILSSYFPIHFTHPKAEEDVEV
KRDDLSRALMLAFSSSPLFEPSVIPLLLEKLSSSLSSAKVDSLKYLSYCTSKYGAERIAK
HAGAIWSSLKDAIFISGQSFVLSFTPESLGGLGCQENEIAAEALALLEKVVNQNNDLFSS
MIVGDEEINMVLNSITGCQSYNEIPLQSTQKLYSVGRILYVSVKASVASCSRIFQYFFSC
LMESMGLPVVNGSGTCSFNDDCIISKRPNHGSLYLCVELLGACRDLVISSDDLASQCVSA
NETWCCLLQRFSTSLSKIFSSILATSTDKPAHDADVYLGVKGLQILATFPGGYLLVSKST
CESILMTFVSIITVDFNKTLLWKLSVKALVQIGLFIHGSNESEKSMSYMDIVVQKIVSMI
SSDNHDIPFQLQLEAISDIGTSGLQYMLKIVTGLQEVIRANLAEVYVQGNVKSAKVIIHL
LECYSNELLPWIQKYEVFEEVLLQFVVSIWNQIENCMAFPDGIFEKELLDATMKVMKLAV
ASCSVESQNIIIDKAYTVLSSSTFLSTKDSLSSLQAQLEELEDTQETDKFSSRDEWIHSL
FTSVIIALHPQTRIPNIRTVLHFLMIVFLKGCVTAAQALGSLVNKLDLKTSGTEYSGGCT
FEEAMDIIFGKNLSSSDHVPAGRSGITGYWSETGLTNLCLGAANSGLLKIHSIVGLAWIG
KGLLMRGHEKVKDITIVFLECLQSNGRMGALPLEENNCNWDMRLSAMKCAADAFQVLMSD
SELCLNRKFHAIIRPLYKQRFFSTIMPILQSLIIQSDSLLSRSMLYRAFANVVIGTPLIV
ILNDAKKLIPMVLDSLKLLSKDVLDKDIMYSLLLVLSGILTDKNGQEAVIENAHIIINYL
IGFVTYPHTMLVRETTIQCLVAMSELPHTRIYPMRIQVLQAVSKALDDPKRAVRQEAVRC
RQAWSVI
NT seq 3444 nt   +upstreamnt  +downstreamnt
atggcagaaccgagtcagctgactcagcatattgaatcttttgttgactcatcatgctcc
tctactcagcaggctgcaagtttggatgcaatagtttccttcgtgaagaatgatgtagta
actatatcatcactggttagggagatggagatgtatctgactacaacagatagcataatc
cgtgcacgaggcatccttctgcttggagaagcacttaaatgtctttcatcaaagccgctg
gatgctgctactattcatagcttgatgtctttcttcaaagagcgactggcagattggaga
gctttgcgtggtgcacttgttggttgtttggcattggtgaaaaggaaaagtggtggtatg
gtcactagcagtgatgctaaaggagttgcagagtcttttttgcaaaacttgcaggttcag
tctttaggacaacatgacaggaagctttgctttgaacttatggaatgtctgctagaatac
tatccccacgctgttgcttctctgggtgatgatcttatttatggaatttgtgaagctatt
gatggagaaaaggatcctcaatgcctaatgctagcatttcacatcatggaggttctagtg
caagtgtttcctgatccttgtggtcccatagaaagttttgctagcgatctatttggcatt
ttgagcagttactttcccattcattttacacatccaaaagctgaagaggatgttgaggtg
aaaagggatgatctttcaagggcattaatgcttgcattctcatcctcgcctcttttcgag
ccatctgtcattccattgcttcttgagaaactttcttcctccctatcatccgcgaaggtt
gattctttaaagtaccttagctattgcacatcaaagtatggagcagaaagaatcgcaaaa
catgctggagctatttggtcttcactgaaagatgcaatatttatttcaggacaatcattt
gtgttatcctttaccccagaatccctaggtggtctaggctgtcaggagaatgaaatagca
gctgaagcactggctctactggaaaaggttgttaaccaaaataatgatttgttctcaagt
atgattgttggtgatgaagaaataaatatggttttgaattccatcactggctgccagagt
tacaatgaaattcccttgcaaagcacacagaaactgtattcagtcggtcgtatcctttat
gtttctgtgaaggcatctgttgcttcctgcagtagaatttttcaatatttcttctcctgc
ttgatggagagcatggggcttccagttgtgaatggatctgggacttgctcttttaatgat
gactgcataatctccaaaagacctaatcacggatctctttatctctgtgttgaacttctt
ggagcatgcagagatttggtcatcagttccgatgatcttgcatcacaatgtgtttccgca
aatgagacatggtgctgcttgcttcagagattttctacctctttaagcaagattttcagt
tcaatcctggcaacaagtacagacaagcctgctcatgacgcggatgtgtatcttggagtg
aagggtttgcaaattctagctacattccctggaggctatttactagtatcaaaatctact
tgtgaaagtattttgatgacctttgtatctattatcactgttgatttcaataagacattg
ttgtggaaactgtcggtgaaggcactggttcagattggcttgtttattcatggtagtaat
gagtctgagaagtcaatgagctatatggatattgttgttcagaagattgtttcaatgata
tcatctgataatcatgatataccatttcaactccaactggaagccatctctgacattggc
acaagtgggcttcaatatatgctgaaaattgttactggattgcaagaagttatacgtgcc
aatctagctgaggtttatgttcaaggaaatgtgaaatcagcaaaggtcataattcatctt
ttggaatgttattcaaatgagttgcttccatggattcagaaatatgaagttttcgaggaa
gtcttgctccaatttgttgtcagcatatggaaccaaatagaaaattgcatggcctttcct
gatgggatctttgaaaaagagcttcttgatgctacaatgaaagtgatgaagcttgctgtt
gcttcttgttcagtggaaagccagaacataataattgataaagcttatactgtactctca
tccagcactttcttatcaacgaaggattccttgtcctctcttcaagctcaactagaagag
ttagaagatactcaagaaacggacaaattttccagtagagatgagtggattcattcttta
tttacatcagtaattatagcacttcatcctcaaacacgcattccgaatataagaacagta
ctgcattttctcatgattgtgttccttaagggctgtgttacggctgctcaggcattaggt
tctctagttaacaaattggatctaaagactagtggaacagagtattcaggtggttgtacc
tttgaagaagcaatggatataatctttggtaaaaatttaagttcttctgaccatgttcct
gctgggagatctggtatcacaggctattggagtgagacaggtctcactaacttatgcctt
ggtgctgcaaacagtggtttgcttaaaattcattccattgttgggttggcatggatcggg
aaaggtttgcttatgcgtggacacgaaaaggttaaagacataactatagtttttttagag
tgcctgcaatcaaatggcagaatgggtgccttgccattggaagaaaataattgcaactgg
gatatgcgcctgtctgcaatgaaatgtgcagcagacgcatttcaggttcttatgagtgat
tctgagctttgcttaaaccgcaaatttcatgcaataatacgaccactttataagcaacga
tttttctccaccataatgcccatcctgcagtctttgataattcagtctgactcattactc
tcaagatctatgctgtatcgggcttttgcaaatgttgtaattggcaccccattgattgtt
atcttgaatgatgcaaaaaagttaattccaatggtgctggatagcttaaagttgttgagc
aaggatgttttggataaagatataatgtacagccttctgctagtcctgtcaggcattttg
acagataaaaatggacaagaagctgtaatagagaatgctcatattatcatcaattacctc
attgggtttgtcacctaccctcatacgatgcttgtccgagagacaacaattcaatgtctt
gttgccatgtcagagttgcctcacacaaggatttaccccatgcgaatccaggtgttgcaa
gctgtatcaaaagctcttgatgatccaaagagggctgttcgtcaagaagctgttagatgt
cggcaagcgtggtcagtgatttag

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