Populus nigra (Lombardy poplar): 133702155
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Entry
133702155 CDS
T10372
Name
(RefSeq) ATP-dependent DNA helicase Q-like 2
KO
K10899
ATP-dependent DNA helicase Q1 [EC:
5.6.2.4
]
Organism
pnz Populus nigra (Lombardy poplar)
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pnz03400
]
133702155
Enzymes [BR:
pnz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
133702155
DNA repair and recombination proteins [BR:
pnz03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
133702155
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
HRDC
RQC
ResIII
R1_ABCA1
DUF4349
RNA_pol_Rpb4
Glyco_hydro_31_2nd
Motif
Other DBs
NCBI-GeneID:
133702155
NCBI-ProteinID:
XP_061982380
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Position
8:complement(13027780..13038578)
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AA seq
713 aa
AA seq
DB search
METEADVLEELLNIETEIEDVQDQIKLLLERQEKLHERQSELKFLLEAYKASGTGNSANE
NASRSSSLEDWSGSFEWDSQADDVRLNIFGIPSYRQNQKEIINAIMSGRDVLVIMAAGGG
KSLCYQLPAILRDGVALVISPLLSLIQDQVMGLTALGIPAFMLTSTTSKENEKFIYKALE
KGEGELKILYVTPEKISKSKRFMSKLEKCHNAGRLSLISIDEAHCCSQWGHDFRPDYKSL
SILKTQFSNVPVVALTATATQKVQYDVMEMLRIPKCVKFVSTVNRPNLFYTVRSKSSVGK
VVVDEIAEFIQESYSNSESGIVYCFSRKECEQVAAELRERGIAADYYHADMDVNAREKVH
TWWSKNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSMETYYQESGRAGRDGLPSECVLF
YRPADVPRQSSMVFYENSGLQNLYDIVRYCQSKRQCRRNAFFQHFAEPLKDCNGMCDNCA
FLSEVMEVDVSRHAKVMVSLLQDTQEKDQRLTMLQLVDKMKNKKELGSDIKKEEMEQLVI
QLILDFVFKEEYQHTAYATNAYVTIGPLANQVLQGKKIVKLEISSKQKNKGDSMKSAKHS
LAFSGLELKLDELREKLSSGHGGIFPHSVLSSQQMSMISSQKPSSAQELEKIIGKLKTEK
YGSKILDEIKKYTGSEPPDNGMLNEEEGSGNRASKRLKTRKGIVVIESSDEEL
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atggaaactgaagcggatgtattagaagagctactcaatatagagacagagattgaagat
gttcaagaccagataaagttattactagaaagacaagagaagttgcacgagagacaatct
gaattgaagtttttgttggaagcatataaagcatctggaactgggaattctgcaaatgaa
aatgcttctcgatcttcttctttggaagactggtcaggttcatttgagtgggattctcaa
gctgatgatgttaggcttaatatttttggcattccctcttatcgtcaaaatcaaaaggag
atcataaatgctatcatgagcggaagagatgttctagtgattatggctgcaggtggtggt
aagagcctttgttaccagctgccagctattcttcgtgatggtgtggccctcgttattagt
cctttactctctttgatccaagatcaggttatgggtttgactgctttaggcattccggct
ttcatgttgacatcgaccactagcaaggaaaatgagaagttcatatacaaggcccttgaa
aagggtgagggtgagcttaagatcttgtatgtcacaccagaaaagatatcaaagagcaaa
agattcatgtcaaaacttgaaaaatgccataatgcggggcgtctctcactaatttcaatt
gatgaggcgcattgctgcagtcagtggggtcatgactttcgccccgactacaagagcctc
agtatcctcaagactcagttttccaatgttcccgtggtggctttgactgcaactgccaca
cagaaagttcagtatgatgtaatggagatgctgcgcattccaaaatgtgttaaatttgtc
agtacggtcaataggccaaaccttttctacacggtacggagcaagtcatctgttggtaag
gtggttgttgatgaaattgctgaattcattcaagaatcttattcaaacagtgaatctggg
atagtgtactgcttctcgagaaaagaatgtgaacaggttgcggcagagttacgtgagaga
ggaattgcagctgattattaccatgcagatatggatgtaaacgctcgtgagaaagttcat
acgtggtggagcaaaaacaagctgcaagtcattgttggtacagtggcatttggaatggga
atcaacaaaccagatgttaggtttgtcatccatcacagcctgagtaaatcaatggaaaca
tattaccaggaaagtggtcgagctggacgagatgggctgccttctgaatgtgtactcttt
tataggcctgctgatgttcccaggcagagttcgatggttttctatgagaattctggattg
cagaatttatatgacatagtaagatactgtcagtctaaaagacaatgtcgtcgaaatgcc
tttttccaacattttgctgagccattaaaagactgcaatgggatgtgtgataattgtgct
tttcttagtgaagttatggaagttgatgtatctcgtcatgcgaaagttatggtttcattg
cttcaagatacgcaagagaaagatcagaggctgacaatgttgcaattagtggacaaaatg
aaaaataagaaggaactaggttctgacataaagaaggaggaaatggaacagcttgtcata
cagcttatacttgactttgtttttaaagaagaatatcaacatacagcctatgctacaaat
gcttatgtgacaataggtccattggcaaatcaggtgctgcaaggcaagaagatagttaag
cttgagatctctagcaaacagaagaataagggtgacagcatgaaatcagcaaagcacagc
cttgcattttcaggtttggagttgaaacttgatgagttgcgggagaaactctcttcaggt
catggtggaatattcccccattctgtcttgtctagccagcagatgagcatgataagttcc
cagaaaccaagttcagcacaagagttggagaagataattggaaagctgaagacagaaaag
tatgggagtaaaattctagatgagatcaagaagtacaccggctctgagccgcctgataat
ggcatgttgaatgaggaagaaggaagcgggaatagagctagcaagaggttaaagacgaga
aagggtattgttgttatcgagagcagtgatgaggaattataa
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