Populus nigra (Lombardy poplar): 133702350 Help Entry 133702350         CDS       T10372                                  Name (RefSeq) protein SPA1-RELATED 2-like   KO K16240   protein suppressor of PHYA-105 1 and protein SPA1-related 2 Organism pnz  Populus nigra (Lombardy poplar) Pathway pnz04712   Circadian rhythm - plant Brite KEGG Orthology (KO) [BR:pnz00001]  09150 Organismal Systems   09159 Environmental adaptation    04712 Circadian rhythm - plant     133702350  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04121 Ubiquitin system [BR:pnz04121]     133702350 Ubiquitin system [BR:pnz04121]  Ubiquitin ligases (E3)   Multi subunit type E3    Multi subunit type E3 associated proteins     133702350 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  WD40_CDC20-Fz WD40_Prp19 WD40 Beta-prop_EML_2 WD40_WDHD1_1st Beta-prop_TEP1_2nd EIF3I WDR55 Beta-prop_RIG_2nd Beta-prop_TEP1_C Beta-prop_EIPR1 Beta-prop_WDR19_1st Beta-prop_HPS5 Beta-prop_DCAF4 Beta-prop_WDR90_POC16_2nd Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd ANAPC4_WD40 Pkinase WD40_like Beta-prop_WDR35_TULP_N PEP5_VPS11_N WD_LRWD1 Mrr_cat PK_Tyr_Ser-Thr WD40_RFWD3 Motif Other DBs NCBI-GeneID:  133702350 NCBI-ProteinID:  XP_061982663 LinkDB All DBs Position 8:complement(15695417..15703439) Genome browser AA seq 1109 aa AA seqDB search MEGLGDEVALMDMAEEAHLQGTESEHSVKPPESSNLLESRETVIASAGDYPESSFHVLAD KLEGKNGNRSANPPMDASKQPCSSPRSMDDAGNMVEELVVRNYDGSNLAVVGTSNNRQRM QARQSQWPHLYQIGGGSVTGISCSNTLYRDRGQALLDVQHPSSSDILVQKTLSNERNDVS EQLVHTDFNGLSGNVSSHGSFRTKILSKSGFSEFFVKNTLKGKGIIYRGPPHDSLKLGPR DQNNERSAGGTLAASDTPLNLSAKTVTMTSSYGITGPSPSGSDHDGVRGGILATSDTPLN LSAKTVRMTSSYGITGPSPSGSDHDGVSLRKWLDAVQLKANKVERLQIFRRIVDLVDYSH SQGVALPDLWPSSFKLLQSNQVKYLGSAVPRDMLESSMDQDTPCSDNHAVRRRPSEQGMF SFVTAFAKKQKFSESMNYISSWPQLSTKHSLKLESTSDGGVDTIVSQDSQNEATERNNDT EYGIQAKSSSHELSKIGQRQLTSIVDRLEEKWYTSPEEFNDGICSIASNIYGLGILLFEL LGRFDTDRAQATVMSDLRHRILPPQFLSENPREAGFCLWLLHPEPASRPSTREILQSELI NGLQEVSAEELSSSIDQDDAESELLFHFLVSLKEQKQNHASKLVEDIRCLDTDIEEVGRR NCSKKHLLHSCLENDFLNARQPTSEHKEPYRLEAFSQVSPDFKTNDMRLMSNISQLESAY FSMRSEVQLAETDATIRQDNDLLRNHENWYIEQEGEETQNTTDCLGSFFDGLCKYARYSK FEVRGLLRTGDFSNSANVICSLSFDRDADYFAAGGVSKKIKIFDFNSIFNDPVDIHYPVI EMSNESKLSCICWNSYIKNYLASTGYDGVVKLWDVSTGQGVFQYNEHEKRAWSVDFSQVC PTKLASGSDDCSVKLWSINEKNSISTIRNIANVCCVQFSSHSTHLLAFGSANYRTYCYDL RNARAPWCVLAGHDKAVSYVKFLDSETLVTASTDNSLKIWDLNKTSSSSSSVSACSVTLG GHTNEKNFVGLSVANDYITCGSETNEVFAYHRSLPMPITSHKFGSIDPISGKETDDDNGL FVSSVCWRGKSDTVVAANSSGCLKVLQMV NT seq 3330 nt NT seq  +upstreamnt  +downstreamnt atggagggattgggtgatgaagtggctttgatggacatggcagaggaggcacacctccaa ggtacagagagcgagcattctgtgaaaccacctgaaagctccaacttgttggaatctcgt gaaacagttatagccagtgctggtgattaccctgagagttcattccatgtacttgctgat aagttggagggcaagaatggaaataggagtgcaaaccctcctatggatgcatccaaacag ccttgttctagccctcgctctatggatgatgctgggaatatggttgaagaattagtggtg agaaattatgatggttcaaacttagctgttgttggtacatcaaacaataggcaaaggatg caagccaggcagagccagtggccgcatctttatcaaattggagggggatcagtaactggg atttcttgtagtaataccttgtatagggaccgtggtcaagcattgctggatgtgcagcac ccatcttcatctgacattttggttcaaaaaaccttgagcaatgaaagaaatgacgtctca gaacaattggtgcataccgactttaatgggttgtcaggcaatgtgagttcacatggtagt ttccggacaaagattctttcaaaatcaggattttctgagttttttgtcaaaaacaccttg aaaggtaaggggattatttatagagggccgccacatgatagcttgaaacttgggccaaga gaccagaataatgaaaggtccgcgggtggcactttggcagcttctgatactcctttgaac ttgagtgctaaaactgtaacgatgacttcttcatatggtatcactgggccgagccctagt ggttctgatcatgatggagtgaggggtggcattttggcaacttctgatactcctttgaac ttgagtgctaaaactgtaaggatgacttcttcatatggtatcactgggccgagccctagt ggttctgatcatgatggagtgagtttgaggaaatggctggatgctgtacagctaaaagca aataaagttgagagattgcaaatatttagacggattgttgatctagtggattattctcac tctcaaggagttgccttgcctgacttgtggccatccagcttcaagttgttgcaatcaaat caggttaaataccttggttcagctgtcccaagagacatgttagaaagttccatggatcaa gatacaccctgctccgacaatcatgcggtcaggagaaggccatcggaacaaggaatgttt tcttttgttactgcatttgccaagaagcagaagtttagtgagagcatgaactatataagt agctggcctcagttatctacaaaacatagcttgaaacttgaatctacaagtgatgggggt gttgatacaattgtctcacaagattctcaaaatgaagctactgaacgtaacaatgacaca gaatatgggattcaggccaagtccagcagccatgagctgtctaaaataggtcaacgacag ttgacttctattgttgaccggttggaagagaaatggtatacaagtcccgaggagttcaat gatggcatctgcagtattgcatcaaatatttatggtcttggaattctactatttgagttg cttggtcgttttgacactgacagagcacaagcgacggtaatgtcagaccttcgtcacagg attcttcctcctcaatttctatctgaaaatccaagggaagctggattctgcctttggcta cttcatcctgaacctgcatcacgcccatcaacaagggaaatcctacaatctgaattgatt aatggattgcaggaggtgtccgcagaagaattatcatcctctatcgaccaagatgatgct gaatcagaactattgtttcatttccttgtttcattgaaggaacagaagcagaaccatgcc agtaagttagtggaagatatcaggtgcttggatactgatattgaagaggttggtaggaga aactgctcaaagaaacacttgctccattcttgcttagagaatgactttctaaatgcaagg caacctacctctgagcataaagaaccttacaggttggaggcattttctcaagtatcacct gattttaagacaaatgatatgaggttgatgagcaatatcagtcagcttgaaagtgcttat ttctccatgagatctgaagtccagcttgctgagactgatgctaccattcgccaagataat gatttactgagaaatcatgagaactggtatatagaacaagagggtgaagaaacacagaac accactgattgcctgggatccttttttgatggtttgtgcaaatatgctcgttatagtaag tttgaagtgcgtgggctactaagaactggggactttagcaattctgcaaatgttatttgt tctttgagttttgaccgtgatgcagactattttgctgctggtggagtatcaaagaaaata aagatatttgattttaattcaatctttaatgaccctgttgatattcattatccagttatt gaaatgtcaaatgagtcaaagctcagctgcatttgctggaacagctacatcaagaactat ctggcttcaactggatatgatggtgttgtgaagctatgggatgtgagtactggtcaaggg gtttttcaatacaatgagcatgaaaagagagcttggtccgtggacttttctcaagtatgc ccaacaaaattagccagtggtagtgatgattgttctgtgaagctatggagcattaatgag aaaaatagtataagcacaatcaggaatattgcaaatgtttgctgtgtgcagttctcttct cactctactcatttgctggcctttggatctgcgaattacagaacctattgctatgatctt cggaacgccagagccccctggtgtgtgttggctggccatgacaaagctgtgagctatgtt aagttcttggactctgaaactcttgttactgcatccactgacaattcactaaagatttgg gatctcaataaaaccagctctagtagttcatctgtcagtgcttgtagcgtaacccttggt gggcacactaatgagaagaactttgtgggtctatctgttgccaatgattacataacatgt ggttcagaaacaaatgaggtttttgcttaccatagatctctacctatgccaatcacttct cacaagtttggctcaatcgatcctatttctggaaaggagacagatgatgacaatgggctg tttgtttcaagtgtctgctggagagggaaatcagacacggttgttgctgccaattcaagt gggtgtttaaaagtattgcagatggtttga

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