Populus nigra (Lombardy poplar): 133702727
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Entry
133702727 CDS
T10372
Name
(RefSeq) anaphase-promoting complex subunit 6-like
KO
K03353
anaphase-promoting complex subunit 6
Organism
pnz Populus nigra (Lombardy poplar)
Pathway
pnz04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
133702727
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pnz01009
]
133702727
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pnz04121
]
133702727
03036 Chromosome and associated proteins [BR:
pnz03036
]
133702727
Protein phosphatases and associated proteins [BR:
pnz01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-5
PP5-interacting proteins
133702727
Ubiquitin system [BR:
pnz04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
APC/C
Other subunits
133702727
Chromosome and associated proteins [BR:
pnz03036
]
Eukaryotic type
Sister chromatid separation proteins
APC/C complex
133702727
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_8
ANAPC3
TPR_14
TPR_12
TPR_11
TPR_7
TPR_19
CFAP70_TPR_C
TPR_16
RMD1-3
TPR_10
TPR_CcmH_CycH
TPR_9
TPR_P4H
CABIN1_N
TTC22_N
TPR_3
ARM_TT21_C
His_Me_b4a2
ARM_TT21_4th
ANAPC8
DUF1963
Motif
Other DBs
NCBI-GeneID:
133702727
NCBI-ProteinID:
XP_061983045
LinkDB
All DBs
Position
9:12541423..12549316
Genome browser
AA seq
544 aa
AA seq
DB search
MREEQIEKLRGVVRDCVSKHLYSSAIFFADKVAAFTDDPADIYMQAQALFLGRHYRRAYH
LLNASKIVLRDLRFRYLAAKCLEELKEWDQCLLMLGDAKVDEHGNVYDTKDCNVMYLDKD
SEDREINISSAICFLRGRAYEALENRALARHWYKAAIKADPLCYEALECLIENHMLTFEE
ETSLLSSLQFGPEDRWLSSFYSCLIKKYDKECVIEAKFREVEKESCNSNPSSPSFMHTLK
NNTDLLACKAEYFNQCGEYQKCFELTSDLLEKDPFHLKCTLVHLAAAVELGNSNELYLMA
SNLVKDYPQKTLSWFAVGCYYYCIKKYDQSRRYFSKATSLDGTFAPAWIGFGNAYAAQEE
GDQAMSAYRTAARLFPGCHLPTLYIGMEYMRTHSYKLAEQFFMQAKTICPSDPLVYNELG
VVAYNMKEYNKAVLWFEKTLKHIPSLSQLWEPTVINLAHAYRKLKIYHEAISCYERALTL
STRSLSTYAGLAYTYHLQDNFTAAITCYHKALWLKPDDQFCTEMLSLALVDEGRRGIDPK
IEFR
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atgagagaagagcagatagagaagcttcgaggggtagtgcgtgactgtgtgagcaagcac
ttatactcctctgccattttcttcgccgacaaagtcgccgccttcaccgatgatcccgct
gacatctacatgcaagctcaggctctcttcctcggccgccactaccgccgcgcctaccac
ctcctcaacgcctccaaaatagtccttcgcgacctccgtttccgctacctcgccgccaaa
tgcctcgaggaattgaaagagtgggaccagtgtttgttaatgcttggtgatgcaaaagtt
gatgaacatggaaatgtatatgacactaaagactgtaatgttatgtacttagataaggat
agtgaagatcgcgagatcaatatttcttcagcaatatgttttctaagaggtagggcttat
gaagcattggaaaatcgtgctctagctcgacattggtacaaagctgctatcaaggctgat
cctttatgttatgaggctttggaatgccttattgaaaatcacatgctcacatttgaagaa
gaaacaagtctactttcctccttgcaatttggtcctgaagataggtggctctcttcattc
tactcttgcttgataaaaaagtatgacaaagagtgtgtcatagaagccaaattcagagaa
gttgaaaaagaaagctgcaatagcaatccttctagcccatctttcatgcatacactaaaa
aacaacaccgatcttttggcttgtaaagcagagtacttcaatcagtgtggtgaatatcag
aaatgctttgaactaacttcagatctgcttgagaaggacccttttcatttgaaatgtaca
ttggtacatttagcagctgctgtggagcttggaaattcaaatgagctgtatctcatggca
tctaacttggtgaaggattatcctcaaaagactctctcatggtttgctgttggctgttac
tactactgtatcaagaagtatgatcaatcacggcgttatttcagcaaggctacgagtcta
gatggaacctttgcacctgcttggattggctttgggaatgcttatgctgctcaagaagag
ggtgatcaagcaatgtcggcatatcgcaccgctgctcgtttattcccagggtgtcatttg
ccaactttgtatattgggatggaatacatgcgaactcacagctataagcttgctgagcag
tttttcatgcaggcaaagacaatttgcccttcagatccacttgtatacaatgaacttggt
gttgttgcttataatatgaaggagtacaacaaggcagtgttgtggtttgagaagactttg
aagcacattccttcgttgagtcaattgtgggaaccaactgtcattaatcttgcccatgcc
tacagaaagttaaagatttaccatgaagcaatttcatgctatgagagagcacttacatta
tcaactagaagcttgagtacttatgctggtcttgcatacacttatcatttgcaggataac
tttactgctgcaattacatgctaccacaaggctttatggctgaaacctgatgatcaattt
tgcactgaaatgttgagcctggcacttgtagatgaaggtcgtcgaggcatcgaccccaaa
attgaatttcgatga
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