Populus nigra (Lombardy poplar): 133702895
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Entry
133702895 CDS
T10372
Name
(RefSeq) translation initiation factor IF-2, chloroplastic-like isoform X1
KO
K02519
translation initiation factor IF-2
Organism
pnz Populus nigra (Lombardy poplar)
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
pnz03012
]
133702895
03029 Mitochondrial biogenesis [BR:
pnz03029
]
133702895
Translation factors [BR:
pnz03012
]
Eukaryotic type
Initiation factors
MTIFs
133702895
Prokaryotic type
133702895
Mitochondrial biogenesis [BR:
pnz03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Mitochondrial translation factors
133702895
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
IF-2
EF-G_D2
MMR_HSR1
GTP_EFTU_D2
IF2_N
Ras
RsgA_GTPase
Arf
Roc
DUF6115
Motif
Other DBs
NCBI-GeneID:
133702895
NCBI-ProteinID:
XP_061983209
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Position
9:complement(15727131..15735800)
Genome browser
AA seq
1035 aa
AA seq
DB search
MGSMVVLVGSMPSLASLMSLGSLSVSTASSSCVESSSYSVLKRVSLSKRSLRKAKRWDCV
CKYSVTTTDFIAEQGNAVSLDSSSSTIRGGSDGDSEVVLKPAPKPVLKSPAGSKDETPLC
MNSVGWGSSSAGGDSDGESSDEEEGERNKVIESLGEVLEKAEKLETSKLSQEGGSASSNR
KQNGVVNKMTSPNVGNDSRNVNSSAANMKTKTLKSVWRKGDSVAALPKVVKEVPKATNRF
IKREPKTVEGAKLESQSTVPLKPPQPPLRPQPKLQGKPSVAPPPMIKKPVILKDVGAAPK
SPVKDETGSRAPQSKGQPILVDKFARKKPVVDPVIAQAVLAPIKPGKGPAPGKYRDRKKN
VSPGTPRRRMVDDDVEIPDEELNVSIPGAATGRKGRKWTKASRKAAKLQAARDAAPVKVE
ILEVGEKGMSIEELAYNLTIGEGEILGFLYSKGIKPDGVQTLDKDMVKMICKEHEVEAID
ADPVKFEEMAKKNEILDEDDLDKLQERPPVLTIMGHVDHGKTTLLDHIRKSKVAASEAGG
ITQGIGAYKVMIPVDGKLQPCVFLDTPGHEAFGAMRARGARVTDIAIIVVAADDGIRPQT
KEAIAHAKAAGVPIVITINKIDKDGANPERVMQELSSIGLMPEDWGGDVPMVQISALKGE
NIDDLLETVMLVAELQELKANPDRNAKGTVIEAGLDKSKGPVATFIVQNGTLKRGDVVVC
GQAFGKVRALFDDGGKRVDEAGPSIPVQVIGLSNVPIAGDEFEVVASLDIAREKAEKRAE
SLWNERISAKAGDGKVTLSSLASAVSAGKLSGLDLHQLNIIMKVDLQGSIEAIRQALQVL
PRDNVTLKFLLQATGDVSNSDVDLAVASEAIILGFNVKAPGSVKSYAERKGVEIRLYRVI
YELIDDVRNAMEGLLEPVEEQEIIGSAEVRAVFSSGSGRVAGCMVTEGKIVKGCGIRIVR
NRKTVHVGVLDSLKRVKEIVKEVNAGLECGIGAEDFDDWEEGDTIEAFNTVEKKRTLEEA
SASMAAALEEAGIDL
NT seq
3108 nt
NT seq
+upstream
nt +downstream
nt
atggggtctatggtggttttagtaggcagcatgccatctttggcttcccttatgagttta
gggagcttgagtgtgtctacagctagctctagttgtgttgaatcttcttcatattcagtt
ttaaagagagtttctttatcaaaaaggagtcttaggaaggctaaaagatgggattgtgtg
tgtaaatattcagttactaccactgatttcattgctgagcaaggcaatgctgtgtcactt
gattctagtagtagtacaattagaggaggaagtgatggtgatagtgaggttgtacttaag
cctgctccaaagcctgtgttaaaatctccagctggttctaaggatgaaacccctttgtgt
atgaattctgttgggtggggttcttcaagtgctggcggggattctgatggtgaaagttcg
gatgaggaggaaggagagaggaataaggtgatcgagtcacttggtgaggttttggagaaa
gctgaaaagcttgaaacttcaaaactgagccaagagggtggtagtgctagtagtaatagg
aaacagaatggggttgtaaataaaatgacttcacctaatgtgggtaatgattcgagaaat
gttaattcatcggctgctaatatgaaaactaaaactttaaaaagtgtgtggcggaaagga
gactctgtggctgcattgccgaaggttgtcaaggaagttccaaaagctactaataggttt
atcaaaagggaacctaaaacagtagaaggagcaaagctagaatctcaatcaactgtacca
ttgaaacctcctcagccacctctaagacctcaaccaaagttacagggcaagccatctgta
gctcctccacctatgatcaagaaacctgttattttgaaggatgtgggggctgctccaaag
tctccagttaaagatgaaactggctcaagagctccgcaaagtaaaggacagccaattttg
gttgacaaatttgcacgcaagaagccggttgttgaccctgtgattgcacaggctgtatta
gcccctataaaaccaggaaagggccctgctcctgggaagtacagagaccgaaagaaaaat
gtttcacctggaacaccaagaaggcggatggtggatgatgatgttgagattcctgatgag
gagctcaatgtttctattcccggtgcagctaccgggagaaaagggaggaaatggactaaa
gccagtaggaaggcagctaaactccaggctgccagagatgcagctcctgtcaaagtagag
attttagaggttggggaaaaaggtatgtcaattgaagagctagcctacaatttgacaatc
ggtgaaggtgaaattcttgggtttctgtactcaaaggggattaagcctgatggggtgcaa
actttggacaaagacatggtaaagatgatatgtaaggagcatgaggtggaggccatagat
gctgatccagtaaaatttgaagaaatggcaaaaaagaatgaaattcttgatgaagacgac
ctggacaaactacaagagaggcctcctgtccttactataatgggtcatgtagaccatggc
aagacaaccctattggatcatattcgtaaaagcaaggtggctgcctcagaagctggtggg
attacacaaggaattggagcatataaagttatgatacctgtggatggcaagttgcaacca
tgtgttttccttgatactcctgggcacgaggcatttggagcaatgagagcccgtggagcg
agggtgactgacattgctattattgtggtggctgctgatgatgggattcgtcctcagact
aaggaggccatagctcatgccaaagcagctggagtgcccattgtaatcacaataaataag
atagataaagatggagccaatccagaaagagtcatgcaagagctctcttctattggtctc
atgccagaggactggggtggtgatgtcccaatggttcagatcagcgctctcaagggggaa
aatatagatgatttgttggaaactgttatgcttgtggcagagttacaagaattgaaggct
aatccagatagaaatgcaaagggcactgttattgaggcaggtcttgataaatctaaaggg
ccagtagcaacttttattgtacagaatggcaccctgaaaagaggggatgtagtggtttgt
ggacaagcctttggaaaggtgcgggctttatttgatgatggtggaaaacgagttgatgaa
gctggaccatctatacctgtacaggttattggtttgagtaatgtaccaattgctggtgat
gaatttgaggttgttgcctcccttgatattgctcgtgaaaaggcagagaaacgtgcagaa
tcattatggaatgaacgcatatcggccaaggctggagatgggaaggtgaccctttcttcc
ttagcttcagctgtctcagcaggaaagctatccggattagacttgcaccagctgaatata
ataatgaaagtcgatcttcagggatctattgaagctatcaggcaagctttacaagtgctc
cctcgagataatgtcactttgaagttcctcttgcaagctacaggagatgtaagcaacagc
gatgttgatcttgctgttgctagtgaagctataattttaggattcaatgtcaaagctcca
ggttctgtcaaaagctacgcagaaagaaaaggtgtcgagattcggctatatagagttatc
tacgaactcattgatgatgtgcgaaatgcaatggaaggacttctggagcctgtggaggaa
caagagataattggctcagcagaagtccgggcagtatttagcagcggcagtggtcgtgtt
gccggatgcatggtaacagaaggcaaaatagtaaaaggctgtggaattaggattgtccga
aacagaaaaacagtccatgttggtgtccttgattcactgaaacgtgttaaggaaatagtg
aaggaggtaaatgccggactagaatgtggtattggggcagaagattttgatgattgggag
gaaggtgatactatagaggccttcaacacagtagagaagaagcgaacccttgaagaggcc
tcagcctccatggcagctgcactggaagaggcaggaatcgacttatag
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integrated database retrieval system
