Populus nigra (Lombardy poplar): 133703402
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Entry
133703402 CDS
T10372
Name
(RefSeq) ABC transporter B family member 15-like
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
pnz Populus nigra (Lombardy poplar)
Pathway
pnz02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
133703402
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pnz02000
]
133703402
04147 Exosome [BR:
pnz04147
]
133703402
04090 CD molecules [BR:
pnz04090
]
133703402
Enzymes [BR:
pnz01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
133703402
Transporters [BR:
pnz02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
133703402
Exosome [BR:
pnz04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
133703402
CD molecules [BR:
pnz04090
]
Proteins
133703402
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_29
AAA_21
AAA_16
Zeta_toxin
RsgA_GTPase
AAA_22
AAA_30
AAA_25
ABC_ATPase
AAA_15
DLIC
nSTAND1
AAA_7
CoaE
Motif
Other DBs
NCBI-GeneID:
133703402
NCBI-ProteinID:
XP_061983868
LinkDB
All DBs
Position
9:15309116..15315160
Genome browser
AA seq
1252 aa
AA seq
DB search
MGGKDSMFRYADGMDKLLMFFGVLGSVGEGLRHPLTMYVLSHVINDYGSSGISLSTDTVN
KYSLKLLYIAIAVGLAAFVEGLCWTRTAERQTSRMRTGYLKSVLRQEVGFFDTQDAGSSA
TYQVVSTISNDASAIQVAICEKIPDCLAQMSCFFFCLVFSFILSWKFTLAALPFALMFIV
PGLVFGKLMMDVTMKMIEAYGVAGGIAEQAISSIRTVYSYVAENQTIDRYSRALQKTKEL
GIKQGFAKGLMMGSMGMVYVSWAFQAWAGTYLVTEKGEKGGSIFVAGINIMMGGLSVLGA
LPNLTSITEATVAATRIFQMIERTPSIDLEDKKGKALSYARGEIDFQDIHFSYPSRPDTP
ILRGLNLRIPAGKTVGLVGGSGSGKSTVISLLQRFYEPNEGQILLDGHKINRLQLKWWRS
QMGLVNQEPVLFATSIKENILFGKEGALMDDVINAAKDANAHDFITKLTDGYETQVGQFG
FQLSGGQKQRIAIARALIRDPKILLLDEATSALDAQSERIVQDAIDQASKGRTTITIAHR
LSTIRTANLIVVLQSGRVIESGSHEQLMQINNGRGGEYFRMVQLQQIAAQKENFNDFIYR
NDGKNSFRMSPAPSPVSLRKSTPRTPVLSPFSPALSIGTPYSYSIYDPDDESFEDDLNQL
NYQAPFQWRLLKMNAPEWGRGLTGCLAAIGAGAVQPINAYCAGSLMSNYFRSDKSAIKHK
SNVLALIFLFIGALNFITSLLQHYNFAVMGERLTKRVREKLLAKLITFEIGWFDDDENTS
AAICARLATEASMVRSLVGDRMSLLVQTFFGSVFAYSIGLVLTWRLTLVMIAVQPLVIGS
FYLRSVLMKSMAGKAQKAQMEGSQLASEAVINHRTIAAFSSEKRMLELFKATLRGPKEES
VKHSWLSGLGLFCSQFFNTAFITLTYWYGGRLLTEGLITSERLFQAFLILLFTAYVIAEA
GSMTNDISKGGNAIRTIFAILDRKSEIDPNNSFDASNIRRKLNGQVEFNNVYFAYPTRPD
QMIFKGLNLKIEAGKTVALVGPSGSGKSTIIGLIERFYDPLKGAVFIDRQDIKSYNLRML
RCHIALVSQEPTLFAGTIRENIAYGKENARESEIRKAAVAANAHEFISGMKDGYDTYCGE
RGVQLSGGQKQRIALARAILKDPSILLLDEATSALDSVSESLVQEALEKMMVGRTCVVIA
HRLSTIQKSNCIAVIKNGKVVEQGSHKELIALGSGGEYYSLTKLQSGSSSYQ
NT seq
3759 nt
NT seq
+upstream
nt +downstream
nt
atgggtggtaaagatagcatgtttcggtacgctgatggcatggacaagttgttgatgttc
tttggggttttgggcagtgttggagaagggttacgacaccctctcacaatgtatgttctt
agccatgtcatcaatgactatggtagctctggtatttctttgtctactgatactgtaaac
aagtattctctcaagctcctgtatattgcaattgctgttggacttgctgcatttgttgaa
ggattgtgttggacgagaactgctgagagacagacttctcggatgagaacgggatatttg
aaatcggtccttagacaagaagttggtttctttgacactcaagatgctggttcttccgca
acctatcaagttgtcagcaccatctccaatgatgccagtgctatccaagtagcaatatgt
gagaagatacctgactgccttgcacaaatgtcatgcttcttcttctgccttgtgttttcc
ttcatactatcgtggaagtttactctggcagctcttccttttgcattgatgtttattgtc
ccaggacttgtattcgggaagctcatgatggacgtgacaatgaagatgattgaagcttat
ggagttgctggtgggattgcggaacaagccatttcttcaataagaactgtatactcatat
gtggcggagaatcaaacaatagaccggtacagccgagcacttcaaaagactaaagaatta
ggaataaagcaaggtttcgcaaagggattgatgatgggaagcatgggaatggtttatgta
agttgggcatttcaagcttgggctggcacttatttggtgactgagaagggagaaaagggt
ggttctatctttgtagctggaatcaatataatgatgggaggactgagcgtattaggtgca
ctcccaaatctaacttccatcacagaggcaacagttgctgctacgcgtatttttcaaatg
attgaacgaactccaagtatagacttggaagacaagaaggggaaggctttatcatatgca
agaggagaaattgattttcaggacatacattttagctatccatcaagacctgacacacca
atcttgcgagggttgaatctcaggattccagctggtaagacagttggtcttgtgggaggc
agtggctccggaaagtctacagtcatttcattgcttcaaagattttatgagcccaatgaa
ggacaaattctcttagatggacacaaaataaataggcttcagctcaaatggtggagatcc
caaatgggtctagttaatcaggaaccagtcctctttgccacatctataaaggagaatata
ttgtttgggaaggaaggtgccttgatggatgatgtgatcaatgctgctaaggatgcaaat
gcacatgacttcataactaagttaactgatggatatgagacacaagttggccagtttgga
tttcaattatctggggggcaaaagcagcgtattgccatagcaagggctctgatcagagac
cccaaaatcctgcttctagatgaggcaaccagtgcactggatgcacagtctgaaagaata
gttcaggatgcaattgatcaggcatcgaaaggaaggacaacaatcaccattgcgcatcgc
ctctccacaatcagaacagcaaacctgattgttgttcttcaatcagggagagtaattgaa
tcaggttcacatgaacagttaatgcaaataaataatggaagaggtggagaatacttccgg
atggtgcagttgcaacagatagcagcacagaaagaaaattttaatgacttcatctataga
aatgatggaaagaactcctttagaatgagtcctgctcccagtccggttagcttgagaaaa
agcactccacgcaccccagtgttaagcccctttagcccagcattgtctatcggcacacct
tattcctactcaatctatgatcctgatgatgaaagtttcgaagacgacttaaaccaactg
aattatcaggcaccttttcagtggcgtctgctgaaaatgaatgcacctgaatggggacga
ggcttgactggatgcttggctgcaataggtgctggagcggttcaacctattaatgcttac
tgtgcaggatcacttatgtcaaactacttccgcagtgacaaatctgctatcaaacataaa
tccaacgtattggccttgatttttttatttattggtgctctcaacttcatcaccagcctc
ctccaacattataattttgcagttatgggagagaggttgacgaaaagagtacgcgagaaa
ctgctagcaaagctgattacttttgagatagggtggtttgatgatgatgagaatacaagt
gcagcaatttgtgcaaggctagccactgaagccagcatggttcgctcccttgttggggat
cggatgtcattgctagtacaaacattctttggttctgtctttgcttattcaataggactt
gttctaacatggaggctaacccttgttatgatagctgtgcaaccattagttattggaagt
ttttatttgaggagtgttttgatgaaaagtatggccgggaaagcacaaaaggcacaaatg
gaaggaagccagctagcaagtgaagctgttattaaccacagaactatagctgcattctct
tctgagaagagaatgttggagcttttcaaagccactttgagaggtcctaaagaagagagt
gttaagcactcatggctgtcaggtcttggcctgttttgctcccagttttttaacacggct
tttatcacactaacatactggtatggtgggaggctcctgacggaagggttaataacctca
gagcgcctattccaagcatttttgatactgcttttcactgcttatgtcattgcagaagct
ggaagcatgactaatgatatatccaaaggaggcaatgccattcgaacaatatttgcaatt
ctcgataggaaaagtgagattgatccaaacaactcatttgatgcttcgaacatcaggaga
aagttaaatggccaagtggagttcaacaatgtctactttgcttatccaacaagaccagat
caaatgatcttcaaaggcttgaacctcaaaattgaagcagggaagacagtggcactggta
gggccaagtggttctggaaaatctactatcattggacttattgagaggttttacgatccc
ttgaaaggagcagtttttattgatagacaggacataaagagctacaacttaagaatgctg
agatgtcatattgcactagtcagtcaagaaccaacactgtttgctggcactatccgcgaa
aatattgcctatggcaaagagaatgcaagagaatctgagatacgaaaggctgcagttgct
gccaatgcacatgaattcatcagtggaatgaaagatgggtatgatacctactgtggagaa
agaggagttcagctatcaggaggtcaaaaacaaaggatagcacttgctcgtgcgatactg
aaggatccatcaatcctgctgttggatgaggcaaccagtgcacttgacagtgtgtcagag
agcttagttcaagaggcacttgagaagatgatggttggcagaacatgtgtagtcattgct
cacagactatcaacaattcagaaatccaactgcattgcggttatcaagaatggaaaggtt
gtagaacaaggctcacacaaagaactcatagcattaggtagcggtggagaatactactct
ctgacaaaactacaaagcggaagctcctcttatcagtaa
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integrated database retrieval system
