Populus nigra (Lombardy poplar): 133703484
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Entry
133703484 CDS
T10372
Name
(RefSeq) uncharacterized protein LOC133703484
KO
K10956
protein transport protein SEC61 subunit alpha
Organism
pnz Populus nigra (Lombardy poplar)
Pathway
pnz03060
Protein export
pnz04141
Protein processing in endoplasmic reticulum
pnz04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
133703484
04141 Protein processing in endoplasmic reticulum
133703484
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
133703484
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pnz04131
]
133703484
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pnz02044
]
133703484
Membrane trafficking [BR:
pnz04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
SEC61 complex
133703484
Secretion system [BR:
pnz02044
]
Sec (secretion) system
Eukaryotic Sec-SRP protein
133703484
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SecY
Plug_translocon
Motif
Other DBs
NCBI-GeneID:
133703484
NCBI-ProteinID:
XP_061984022
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Position
9:12400891..12404830
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AA seq
476 aa
AA seq
DB search
MGGGFRVLHLVRPFLSFLPEVQSADRKIPFREKVIYTVIALFIFLVCSQLPLYGIHSTTG
ADPFYWMRVILASNRGTVMELGITPIVTSGLVMQLLAGSKIIEVDNNVREDRALLNGAQK
LLGILIAVGEAVAYVLSGMYGSVGQLGVGNAILIIIQLCFAGIIVICLDELLQKGYGLGS
GISLFIATNICENIIWKAFSPTTINSGRGAEFEGAVIALFHLLITRTDKVRALREAFYRQ
NLPNVTNLLATVLIFLIVIYFQGFRVVLPVRSKNARGQQGSYPIKLFYTSNMPIILQSAL
VSNLYFISQLLYRRYSGNFLVNLLGKWKESEYSGGQFVPVGGLAYYITAPSSLADMAANP
FHALFYFVFMLSACALFSKTWIEVSGSSARDVAKQLKEQQMVMPGHRESNLQKELNRYIP
TAAAFGGICIGALTVLADFMGAIGSGTGILLAVTIIYQYFETFEKEKASELGFFGF
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgggaggtggatttagggtgcttcatcttgtcagaccatttctgtcatttcttcctgaa
gttcagagtgctgacagaaaaattccgtttcgtgagaaggtcatatacaccgtgattgct
ctttttattttcttggtgtgcagtcaactcccattgtatggtattcattcgacaaccggt
gcggatcctttctactggatgcgtgttattcttgcatccaaccgtggtactgtcatggag
cttggtatcactccaattgtgacatctgggctagtaatgcaactgcttgctggctcaaag
atcattgaagtggacaacaacgtccgtgaagatcgtgcactgttaaacggtgcgcagaag
ttgctaggtatcctgatagctgttggtgaagcggtggcatatgtgctctcagggatgtat
ggcagtgttggccaacttggggtaggaaatgccattcttatcattattcagctttgtttt
gctgggatcattgtgatatgtttggacgagcttcttcagaaaggatatggtttaggctct
ggaatttcccttttcatagcaaccaatatctgtgaaaacattatctggaaagcatttagt
ccaaccaccatcaatagtgggcgtggtgctgaatttgaaggagctgtcattgctttattc
catctgctgataacccgaacagacaaagttcgtgctctccgagaggcattttacaggcag
aatcttccaaatgtgacaaatcttctcgctacagtcttgatctttctcattgtcatctac
ttccaagggttccgtgtggttttacctgtgaggtcaaagaatgctcgtgggcagcagggt
tcatatccaatcaagctgttctacacctctaacatgcccattattttgcagtctgctctt
gtatcgaacctgtacttcatctcccagttgttgtacaggaggtacagtggaaacttcctt
gtgaatcttttgggcaaatggaaggaatctgaatattcaggtggtcagtttgtccctgtc
ggcggccttgcgtattatatcactgcaccctcaagcttagctgatatggcggcaaatcct
ttccatgcacttttctattttgtgtttatgttgtcagcatgtgctctgttctcaaaaact
tggattgaagtatctggatcatctgctagagatgtagccaagcagctcaaggaacaacaa
atggttatgcctgggcatcgcgagtccaacttacagaaagagttgaaccgttacataccc
actgctgcagcttttggaggcatttgcattggtgcactgacagtgttggcagatttcatg
ggagctatcggctcaggaacaggaatactactcgcagttacaataatttatcagtacttt
gagacctttgagaaggaaaaggccagcgaacttggcttctttggtttctaa
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