Populus nigra (Lombardy poplar): 133703531
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Entry
133703531 CDS
T10372
Name
(RefSeq) protein TRANSPORT INHIBITOR RESPONSE 1-like
KO
K14485
transport inhibitor response 1
Organism
pnz Populus nigra (Lombardy poplar)
Pathway
pnz04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
133703531
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pnz04121
]
133703531
Ubiquitin system [BR:
pnz04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
133703531
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Motif
Pfam:
Transp_inhibit
F-box_5
LRR_At5g56370
LRR_4
LRR_6
F-box-like
F-box
Motif
Other DBs
NCBI-GeneID:
133703531
NCBI-ProteinID:
XP_061984106
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Position
9:complement(3194541..3200886)
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AA seq
585 aa
AA seq
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MDSNPKMRKEFLDSTRSSLFPDEVLERVLSLLKSHKDRSAVSLVCKDWYNAESWSRTHVF
IGNCYSVSPEIVARRFPRIKSVTLKGKPRFSDFNLVPENWGADVHPWFVVFAAKYPFLEE
LRLKRMAVSDESLEFLALNFPNFKVLSLLSCDGFSTDGLAAIATHCKNLTQLDIQENGID
DKSGNWLSCFPENFTSLEVLNFANLNTDVNFDALERLVSRCKSLKVLKANKSISLEHLQR
LLVCAPQLTELGTGSFMPELTARQYAELGSSFNQLKNLNTLSGLWEATAPYLPVLYPACT
NLTFLNLSYAFLQSIELASLLCQCPRLRRLWVLDTVGDKGLEAVGSNCPLLEELRVFPAD
PFDEEFIHGVTEAGFLAVSYGCRRLHYVLYFCRQMTNAAVATIVQNCPDFTHFRLCIMNP
GQPDYLTNEPMDEAFGAVVRTCTKLQRLSVSGLLTDLTFEYIGQYAKNLETLSVAFAGSS
DRGMQCMLEGCPKLRKLEIRDCPFGNAALLSGLEKYESMRSLWMSACNVTMNGCRVLARE
MPRLNVEVMKEDGSDDSQADKVYVYRSVVGPRRDAPPCVLTLSGL
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atggattcgaatccaaagatgagaaaggaatttcttgactcaacaagatcatctctattt
ccagatgaagtactggaacgagttctttcactcttgaaatcacacaaagatcgtagcgca
gtctctttagtatgcaaggattggtacaacgcagagagctggtcaagaactcatgttttt
ataggaaactgttattcagtctctcctgaaattgtcgcacgtagattcccaagaattaag
agtgtgactctcaaagggaagccgagattttctgattttaatctggtccctgaaaactgg
ggagctgatgttcatccttggtttgtagtttttgctgcaaagtatccctttttggaagag
ttaaggcttaagagaatggctgttagcgatgaaagtttggagtttttggctcttaatttt
cctaatttcaaggttctttctcttttgagctgtgatgggtttagtactgatgggcttgct
gctattgccactcattgcaagaatttgactcagcttgatatacaagagaatggcattgat
gacaagagtggcaactggttaagctgcttccctgaaaacttcacatcattggaagtactg
aactttgccaacttgaacactgatgtcaattttgatgcacttgagaggcttgtaagtcgg
tgcaaatcactgaaggttctgaaggccaacaaaagtatttccttggaacacctacaaagg
ctgctggtttgtgctccacagttaacagagcttggtactggttcattcatgccagagctt
acagctcgccagtacgctgagcttggaagttcatttaaccagttgaagaatttaaatacc
ctttctggtttatgggaggcaacagcaccatacttaccagttctctatcctgcctgtaca
aacttgactttcttaaacttgagctatgcctttctgcaaagtattgaacttgcgagtctt
ctttgtcaatgtccacgtcttcgacgcctctgggtcttggacactgtgggggacaaaggt
ttggaggctgttggatctaactgtccattgcttgaggagctccgtgtcttccctgcagat
ccctttgatgaggaatttatccatggggtgactgaagctgggtttcttgctgtgtcttac
ggatgtcggagactccactatgttctctacttttgcaggcagatgactaatgctgcagta
gccaccattgtgcagaactgcccagatttcacccacttccgtctctgcataatgaatcca
ggccagccagattacttgacaaacgaacccatggatgaagcttttggggcggtagtgagg
acatgcactaaactacagaggctttctgtttcaggtctcttgactgacctgacattcgag
tatattgggcagtatgccaaaaatctggaaactctgtcagtggcttttgctggcagtagt
gatagggggatgcagtgcatgctggaaggttgtccaaagttgaggaaacttgagataagg
gactgcccatttggaaatgcagcacttctttcaggtttggagaaatacgagtcaatgagg
tcactttggatgtcagcctgcaatgtgacaatgaatggctgtcgggtattggcaagggag
atgcccagattgaatgtagaggtaatgaaagaggacgggagtgatgattctcaggctgat
aaagtttatgtatatcgttctgttgtgggaccaagaagagatgccccaccttgtgtactg
actctctcaggtttataa
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