Populus nigra (Lombardy poplar): 133703570
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Entry
133703570 CDS
T10372
Name
(RefSeq) rhamnogalacturonate lyase B-like
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
pnz Populus nigra (Lombardy poplar)
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
133703570
Enzymes [BR:
pnz01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
133703570
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GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
GFP
NA-iREase2
Motif
Other DBs
NCBI-GeneID:
133703570
NCBI-ProteinID:
XP_061984152
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Position
9:complement(514890..518828)
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AA seq
650 aa
AA seq
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MGKGNVRLINQGPYVMLDNDLVRLTLLKPQGYLTGIKYGGMDNILDLQSNESNRGYWDMN
WNLPGGKDRYQSVNGAEYSVIYNSNDKLEISFRSTYDPSNKGTKLPLSIDIRYILSSGVS
GFHCYAIYERPAGSPAFDLVQTRMVFKLRRDKFHYMAISDEKQRVMPMPEDLLPGSGKQL
IVPESVLLVNPINPDLKGEVDDKYQYSMDNKDGGVHGWIGSGPVIGFWVIFPSHEFRNGG
PTKQNLTVHTGPTCLAMFHGTHYIGDDIVAQFEEGEAWRKVFGPFFVYLNSTSNVSDAYN
LWIDAKKQRLLEEATWPYEFVSSPYYLNAKERGSATGRLFVQERFVSESLIPAKNAHAGL
STARAQGAWQTESKDYQFWVQTDSNGNFTIKNVIPGVYGFHGWVPGFIGDFLDNTLVTIS
EGSETQLGNLTYVPLRDGPTIWEIGFPDRTVIGFYVPDVNPMYVNKLFVNSPEKFRQYGL
WDRYTDVHPESDQTFTIGISDPKKDWFFAHVDRRVADKYIPSTWTIKFLLNSIKNGIYKL
RLAIASANRSDLQVYLNDMDKEHMVFQVMNLGAENAVCRHGIHGLYRLFSIDIPSSLLLN
GDNSMFLVQARGGDALCGIFYDYLRLEAPASPANSKQREELESFLFDSHV
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaggggaacgtgaggttgatcaaccaaggtccatacgtgatgctagacaatgat
ttggtgaggctcacactattgaaacctcaagggtatttaacagggattaagtatggagga
atggataacattcttgatcttcaatcaaatgaatctaatagaggatattgggacatgaac
tggaacttgccaggaggaaaggacagatatcaatcggtaaatggagctgaatatagtgtg
atttataatagtaatgacaagttagagatttcatttaggagtacttacgatccttcaaat
aaaggcaccaaactgcctctcagtattgacataagatacatattgagtagtggtgtttca
ggattccactgctatgcaatctacgagcgtccggcaggatctcctgcttttgatcttgtt
cagacaaggatggtctttaagttgcgacgcgataagtttcattacatggcaatcagtgat
gaaaagcaaagggtaatgccgatgcctgaagatctacttccaggtagtggaaagcagcta
attgtgcctgagtctgttcttttggtgaatcccattaatcctgatcttaaaggagaggtt
gatgacaagtaccagtattcaatggacaataaagatggtggagtccatggatggattggt
tctggccccgttattggattctgggtcatcttccctagtcatgaatttcgaaatggtggt
cctactaagcaaaatcttactgtgcatactggtccaacttgcctagctatgtttcatgga
actcactatatcggagatgatatagtagctcaatttgaagagggtgaggcatggaggaag
gtttttggccccttctttgtgtaccttaattcaacctcgaatgtttcagatgcgtacaat
ttatggattgatgctaaaaaacagaggctgcttgaggaggcaacatggccatatgaattt
gtgtcatcgccttactaccttaatgctaaagaacgcggttctgctacaggaagactcttt
gtccaagaaaggtttgtttccgagtctctgataccagctaaaaatgcacatgctggtcta
tcaactgcaagagctcaaggagcctggcaaacagaaagcaaggactatcaattctgggtt
caaacagattcaaatggaaatttcaccatcaagaatgttattcctggggtgtatggattc
catggctgggttcctggtttcatcggtgacttcctagacaatacacttgttaccatctct
gaaggatcagaaacacaacttggaaatttgacatatgttcccctcagagacgggccaaca
atatgggaaattggcttccctgatcgtacagttatcggtttctatgttcctgatgtcaat
cccatgtatgtgaacaagctatttgtcaacagccctgaaaagttcaggcaatatggattg
tgggacagatacacagatgtgcatcctgaatctgaccagactttcacaataggcatcagt
gatccaaaaaaagattggttcttcgctcatgtagacagaagggtagcagataagtatatt
ccatcaacatggacaattaaatttcttctcaactcaataaaaaatgggatttacaagctg
agattggccatcgcctcagcaaaccgttctgacctccaggtgtatctcaatgatatggat
aaagaacacatggtctttcaagtgatgaatttgggagcagagaatgcagtttgtcggcat
ggaattcatggattatatcggctatttagcattgatattccctcatctttattattaaat
ggagataactccatgtttctagtacaggccagaggtggagatgcactttgtggaattttc
tatgattatttaaggctagaagctcctgcatctccagcaaattcaaagcagcgggaagaa
ctagaatcatttctgtttgactctcatgtttaa
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