Populus nigra (Lombardy poplar): 133703737
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Entry
133703737 CDS
T10372
Name
(RefSeq) enhancer of mRNA-decapping protein 4-like isoform X1
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
pnz Populus nigra (Lombardy poplar)
Pathway
pnz03018
RNA degradation
Brite
Messenger RNA biogenesis [BR:
pnz03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
133703737
mRNA degradation factors
5'-3' decay
Decapping complex
133703737
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
133703737
NCBI-ProteinID:
XP_061984351
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Position
9:17670257..17677675
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AA seq
1357 aa
AA seq
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MASRNHHQQQPSPSHSPPLDMHTFFMPTPTSPPPPSQNPSPPLPPNLMVLPPQQIPSSSY
PPPTGTHHFPFPFPPSYPPQQNPNPNNPPPLANMHPQRTLSYPTPPLTPNQQLQDRSGAE
IMALLRPPQNQEPPPLPPPAQDLSGALGSNFMGPVRTPSCTSSKMPKGRRVVGEDVVYDV
DVRLPGEAQPQLEVTPITKYISDPQLCLGRQIAVNKSYICYGLKQGSIRILNINTALRSL
FRTQSQRVTCMAFFAEDVHLLASAGIDGRINVWKISEGPDEEDKPQITGKTIIAIQVAGE
GEIKNPKVCWHCYKQEILVVGVGKRVLRIDTNKVGKGEVYSSEAPLQCPVDKLIDGVRFI
GKHDGEVTDLSMCQWMTTRLVSSSMDGTIKIWDGLKASPLVVLRPHDGQPVYSAMFLTAT
DQPDHIILVTAGPQIRELKIWVSASEEGWLLPNDSDLLNCTQTLELKSSAEPRVEEAFFN
QVVALSQMGLILLANAKRNAIYAVHIDYGPNPASTRMDCISEFTVTMPILSLTGTSDVLH
GQSVTQVYCVQTQAIQQYTLELCQCLPPLMENVGSERSDSSVMHDVPNADGYAALESCGS
KYSDVLMSFASVDVATLQQDAPTSNMESRTIALASSTGDADIVCAPSPPHPRLTRDLTEF
AVGGRFEPSPASSNQPAINHSVDQQMDPICSNSSNVPSLDSDLRNDERKIVQDNNSTTLN
LLVTFKHPTHLITPSEILMGASSSEITKVNESKSEVDSNFLDVVVNNDVANAEVEVKIVG
ETRSTQDGEFSLRGESKRPVFENKEKIFSSQASDLDIEMTRECCALPPETNIVEEQGQVD
GVGASESLSPPSNAGKDEVHDSTKDVSGKVSESSVSTVGPLSTTLSTKGKKQKGRNSQAS
GSSSQPPGTFNSADSLNEPVRASNLLAMDGAFSQILAMQQSINQLVITQKEMHKQMSNMV
AVPVSKECRRLETALGRSIEKAIKANADAPCARFQEENAKNERLLQDHTQQITSLVLNFI
NKDLSAMLEKAPKKELASVVQGAVRTISPVIDKTVSSVIVESFQRGVGDKAVNQLEKSVN
SKLQATVARQIQAQFQTSGKQALQDSLKAGLEASVIPAFEMSCKAMFDQVDAAFQRGMVE
HTAAAQQHFDAAHSSLALTLRDSINSASSLTKTLSMELADSQRQLLAIASNSGATNRLAT
QPSDGPLASFHEKVETQVDPTKELKRLISESKYDEAFTIALQRSDVAIVSWLCSQVGLQG
IMSLSPLPLSQGVLLSLLQQLACDINNDTPRKLEWMTAVAAAILPTDQMIVLYARPIVEQ
VVEIVNRAMTSPAVTGAELASIRVLMHVINYLLVTCK
NT seq
4074 nt
NT seq
+upstream
nt +downstream
nt
atggcatcccgaaatcatcaccaacagcagccatcaccgtcacattctcctcctcttgac
atgcacacattcttcatgcccacacccacttcaccaccaccaccctcccaaaacccttca
ccccctcttcctcccaacctcatggttcttccaccccaacaaatcccttcctcttcttac
cctccccccactgggacccaccacttccccttccccttcccaccctcctaccctccccaa
caaaaccctaacccaaacaacccaccacctcttgctaacatgcacccccaacgtaccctc
tcctatcctacaccccctctcaccccgaaccaacaactccaagaccgttctggtgccgaa
atcatggccctcctccgccctcctcaaaatcaagaaccaccaccactgcctccgccagcc
caagacttatccggggctcttggcagtaattttatgggtcctgttaggacgcctagctgt
actagcagtaagatgcctaagggcaggagggtggttggtgaagatgtagtgtatgatgtg
gatgttaggttgccaggagaggcacagccgcagcttgaagttacgccgataaccaagtac
atttcggatcctcagctgtgtttaggaaggcaaattgctgttaataagagttatatttgt
tatgggttgaagcaagggtctattcggattcttaatatcaatactgcgttgaggtctttg
tttcgtactcagtctcagagggtcacttgcatggctttttttgctgaggatgttcatctt
ttggctagtgctggaatagatggacggattaatgtctggaagatctctgaaggtccagat
gaggaagataagccacagattacaggaaagactattattgctatccaagtagctggtgag
ggggaaataaagaacccaaaagtctgttggcattgttataaacaggaaattttggtggtc
ggagttggtaaacgagttctgagaattgatactaacaaagttggaaagggtgaggtctat
tcctctgaggcacctcttcaatgtcctgttgacaagctgattgatggggtccgattcatt
ggtaaacatgatggagaagtcactgatttgtcaatgtgccaatggatgaccacccgcttg
gtttcttcttctatggatggcacgataaagatttgggatggtctcaaggcatcaccactt
gtggttttgagaccgcacgatggccaacctgtttattcagccatgttcttgactgctact
gaccagccagatcacatcatacttgtcacagcagggcctcagattagggaattgaagatt
tgggtctcagccagtgaagaaggctggctcctgcctaatgattctgatttgttgaattgc
acccagacattagagctgaagagttcagctgaacctcgagttgaggaggcattcttcaat
caagtagtagcattgtctcaaatgggacttattttacttgcaaacgcaaagaggaatgct
atatatgctgtgcacatagattatggtcctaatccagcatcaactcgtatggattgcata
tcagagtttactgtcactatgcctatcttgagtttaaccgggacaagtgatgtcttgcat
ggccaatctgtcactcaagtttattgcgtacagacacaggcaattcaacagtatactttg
gaattatgccagtgcctgccacctttgatggagaatgtgggttcagagaggtcagattcc
agtgtaatgcatgatgtacctaatgctgatggatatgctgccttggagtcatgtggaagt
aaatattctgatgttcttatgagcttcgcatcagttgatgtggccactctgcaacaagat
gctcccacttcaaatatggaatccagaactattgctttagcctcatcaactggtgatgct
gatattgtttgtgctccttcgcctcctcatcctcgcttaactagagatcttactgagttt
gcagttgggggaagatttgagccaagtcctgcatccagcaaccaaccagctatcaatcat
tcagttgaccagcaaatggaccctatttgttcaaattcatccaatgtgccttccttggat
agtgacttgaggaatgatgagaggaaaattgtacaagataataattctaccactcttaat
cttcttgttacatttaaacatccaactcatctaataaccccttctgagattttaatgggt
gcttcatcctctgaaattaccaaagttaatgagagcaaaagcgaggttgactcaaatttt
ctggatgtggttgtcaataatgatgttgccaatgctgaggtggaagttaaaatagtgggt
gaaacaagatccactcaagatggtgaatttagtcttcgaggagaatccaaaaggcctgtt
tttgaaaacaaggaaaaaatctttagctcccaggcttcagatcttgatattgagatgaca
agagagtgctgtgcattgccaccagaaacaaatattgtggaggaacagggacaagttgat
ggcgttggtgctagtgagtctctttccccaccttctaatgctggcaaagatgaagtccat
gactcaacaaaagatgtatctggaaaagtttccgagtcttctgtgtcaacagttggtcca
ctgtcaactactctaagtacaaaagggaagaagcagaaggggagaaattctcaagcatca
ggttcatcttctcaacctccaggcacttttaattcagcagattctttgaacgaacctgtc
agggcttcaaatctccttgccatggatggtgctttttctcaaattttggctatgcagcaa
tcaattaatcagctagtgatcacacaaaaggaaatgcataagcagatgtcaaatatggtt
gcagtccctgtttctaaagaatgtagaagactagagacggctttgggacggagcattgag
aaagccatcaaagcgaatgctgatgctccgtgtgctcgatttcaagaagagaatgcgaag
aatgagaggttattgcaagatcacacgcagcagataacaagtctggtcttgaattttatc
aataaggacttgtcagccatgttagagaaagcaccgaagaaagaattggcttcagttgta
caaggtgcagttcgtacaatatctccggtcattgataaaacagtatcttcagttatagtt
gagtctttccagagaggagttggtgataaggcagtgaatcaactggaaaaatcagttaat
tcgaaacttcaggctactgttgctaggcaaattcaagcacagtttcaaacctctggcaag
caagctctccaggattctttgaaggctggtctggaagcctcagtaattcctgcctttgag
atgtcatgcaaagctatgtttgatcaagtagatgctgcctttcagagaggaatggtcgag
catacagctgcagcacagcagcattttgacgctgcccattcttctttggcactcacttta
agggattcaatcaactcagcatcgtcattgacaaaaaccttgagtatggagttggctgat
agtcaaagacagctgttagctattgcctcaaactcaggtgcaacaaatcgattggccacg
caacctagcgacggacccttggctagcttccatgagaaggttgaaacacaggtggatcca
acgaaagagctaaaaagattaatatctgaaagcaaatacgatgaggctttcactattgcg
ctccaaagaagtgacgtggctattgtatcctggctgtgcagtcaggttggtttgcagggt
atcatgtctctgtctcccctccctctaagccagggagtattactctctctgctacaacaa
ctggcctgtgatataaacaatgatactccccgaaagcttgagtggatgacggcggtggca
gctgcaatactgccaactgaccaaatgattgtattatacgcgcggccaattgttgagcaa
gtcgttgagattgtgaaccgtgcaatgacctcacctgccgtcactggtgccgagcttgca
agcatccgcgttctcatgcatgtcattaattacttgctggtgacctgtaaataa
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