KEGG   Populus nigra (Lombardy poplar): 133703739
Entry
133703739         CDS       T10372                                 
Name
(RefSeq) E3 ubiquitin-protein ligase RMA1H1-like
  KO
K10666  E3 ubiquitin-protein ligase RNF5/185 [EC:2.3.2.27]
Organism
pnz  Populus nigra (Lombardy poplar)
Pathway
pnz04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:pnz00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    133703739
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:pnz04121]
    133703739
Enzymes [BR:pnz01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     133703739
Ubiquitin system [BR:pnz04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    133703739
SSDB
Motif
Pfam: zf-C3HC4 RING_XB3-XBAT31 zf-RING_UBOX zf-C3HC4_2 zf-RING_2 zf-C3HC4_3 zf-RING_5 zf-C3HC4_4 Prok-RING_4 zf-rbx1 zf-ANAPC11 FYVE Baculo_IE-1
Other DBs
NCBI-GeneID: 133703739
NCBI-ProteinID: XP_061984354
LinkDB
Position
9:complement(4020420..4023301)
AA seq 233 aa
MEFEKYFTQGWKSVSSAATDSENPSGCFDCNICFDFAHEPVVTLCGHLYCWPCIYKWLHV
QSASLASDEHPQCPVCKADISHTTMVPLYGRGQGSTEAEGKTPYRGMIIPPRPSACGAQG
VVSNTSNTGQRLPYRNPYRSHNYNANPYGSFEEASPSPLLNLGDPTMTGLQQPVVGMFRE
MVYARVFGPFPNSYHLMGTGSPRLRRHELMADKSLNRISIFLFCCFLLCLIVF
NT seq 702 nt   +upstreamnt  +downstreamnt
atggaatttgagaaatattttacccagggatggaaatcagtttcaagtgcggcaactgac
tcggaaaatcccagtggttgtttcgactgcaatatctgttttgactttgcacacgagcca
gtagtcaccctctgtggccacctctactgctggccctgcatctacaagtggctccacgtc
cagagcgcctcgcttgcctctgatgagcacccgcaatgcccagtttgcaaggctgatata
tctcacaccaccatggttcccctctatggccgtggccaaggctcaaccgaagctgaaggc
aagacaccatacaggggcatgatcattcctcccagaccttcagcttgtggtgctcaaggt
gtggtgtcaaacacatctaacaccggccagcggcttccatatcgtaatccttaccggagc
cataactacaatgctaatccatacggcagtttcgaagaggcatccccatcacccttgctt
aatcttggagaccctacaatgaccggtttgcagcaaccagttgttgggatgttcagagag
atggtgtatgcgagggttttcggtccctttccaaactcgtatcacttaatgggtactggt
agccctaggctgagaaggcatgagctgatggcagacaagtcattgaatagaatctccatt
tttctcttttgttgctttcttttatgcctcattgtattttga

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