Populus nigra (Lombardy poplar): 133703774
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Entry
133703774 CDS
T10372
Name
(RefSeq) probable E3 ubiquitin-protein ligase ZFP1
KO
K19041
E3 ubiquitin-protein ligase RNF38/44 [EC:
2.3.2.27
]
Organism
pnz Populus nigra (Lombardy poplar)
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pnz04121
]
133703774
Enzymes [BR:
pnz01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
133703774
Ubiquitin system [BR:
pnz04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
133703774
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-C3HC4_2
zf-C3HC4
zf-RING_5
zf_RING_Vps8
zf-C3HC4_3
zf-RING_11
zf-RING_UBOX
zf-ANAPC11
zf-RING_Vps41
zinc_ribbon_16
zf-RING_16
FANCL_C
PHD_NSD
Prok-RING_4
zf-RING_10
PHD
Motif
Other DBs
NCBI-GeneID:
133703774
NCBI-ProteinID:
XP_061984413
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Position
9:complement(11051493..11055956)
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AA seq
551 aa
AA seq
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MGQRNMLCTNQMIDLEMDQQSQGYLHPEPCILLGGVTNFRPSDIPTMVAASGNTNNRDAH
LVDHYDGAMFYGMPQYHGLHPHRQYHGPNLDLSVATAPNFYVPYMTPSSGIPISHGPCDQ
LSSSNNYGVIEVSADEYGTNSHFMDNARGSFKRKNAEGNPGNFQYLNASASSSSSVAPLN
TRHSEGGALMDATSFTPPHYRGSSASSIRDVGSQSSVRNRLGAAGLDPALAHNLNHFIQG
NYLGQPYQPSGSLWLDQHLSNSATDAGTSGWTQTTAIPYMHGNNLNGGPIEIGNMGLQRY
HEPASNRSNASFSRPSAVNLQHHNFHHMSPPIQGMRGHNINILPQAPAASFRVPTANASQ
ITMNPSQDGLDIGLRHLGSVQPTGLRMYRPHREGVVPETTLRHRNLPQLRVLPTDGVAIL
GFPDYYEVENHVDHHRDMRLDIEDMSYEELLALGERIGNVNTGLSEGTIRSQLKTRTYLS
SPSINLEEAACMDQEADSCIICQDDYKSKEKIAALDCGHEYHAVCLKKWLRLKNVCPICK
SEALNAERMDV
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atgggacaaagaaacatgctatgcaccaatcaaatgattgatttagaaatggatcaacaa
agccagggatatctacatcctgagccttgcatccttttagggggtgtgacaaacttccga
ccatctgatattccaaccatggttgcagcttcagggaacactaacaatcgtgacgctcat
ctagtggatcattatgatggtgctatgttttatggtatgccccaataccatggtcttcat
cctcatcgtcaatatcatggcccaaatcttgatttaagtgttgctactgcacccaacttc
tatgttccttacatgactccatcttctggtattcctatcagtcatgggccttgtgatcag
ttatcatcttccaacaattatggagtgattgaagtttctgctgatgagtatggaacaaac
agtcacttcatggataatgctagaggttcattcaaaagaaagaatgctgaaggaaaccca
gggaatttccagtatctgaatgcatcggcaagctctagttcttcagttgccccattgaat
actaggcattctgaggggggtgctctgatggatgctacatcattcaccccgccacattac
cgagggagcagtgcttcatcaatcagagatgtgggatctcaaagcagtgtaaggaataga
ttaggtgctgctgggttagatcctgctctggcgcacaatctaaaccattttattcaagga
aactatttgggtcaaccctatcagccaagtggctctctttggctagatcaacatttaagc
aacagtgctactgatgcaggcacttcaggatggactcagaccactgctattccttacatg
catgggaacaatctcaatggaggtcctatagaaattggaaatatgggtctacagcggtat
catgagccagctagcaacagaagtaatgccagtttctcccgcccttctgcagtgaacctt
cagcaccacaattttcatcacatgtctccaccaattcaaggaatgagaggccacaatatt
aatattcttcctcaagcaccagcagcttcattcagagttcctacagccaatgcctcacaa
atcaccatgaatccatctcaagatggtttagatattggacttcggcatctaggatcagtt
caaccaactggccttagaatgtacaggcctcaccgtgagggagttgtacctgagaccacc
ctaagacatcgcaacctccctcagttgagagtattgccaacagatggggtagcaatatta
gggttccctgactattatgaagtagagaatcatgttgaccaccacagagatatgcgcttg
gatatagaggacatgtcttatgaggagcttcttgcacttggggagcgaattggcaatgta
aatactggattgtcagagggaaccatcagaagccaattaaaaacaagaacttatttatca
tctccttcaatcaatttggaagaggcagcttgtatggatcaagaagctgattcttgtatt
atttgccaggatgattataagagcaaggagaaaattgcagctcttgattgtggacatgag
tatcatgcagtttgcttgaagaagtggctacgcttgaagaatgtctgccccatctgcaaa
tcagaagccttaaacgcggaaagaatggacgtttaa
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