Populus nigra (Lombardy poplar): 133703883
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Entry
133703883 CDS
T10372
Name
(RefSeq) uncharacterized protein LOC133703883 isoform X1
KO
K12606
CCR4-NOT transcription complex subunit 9
Organism
pnz Populus nigra (Lombardy poplar)
Pathway
pnz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
133703883
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pnz03019
]
133703883
Messenger RNA biogenesis [BR:
pnz03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
133703883
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rcd1
Motif
Other DBs
NCBI-GeneID:
133703883
NCBI-ProteinID:
XP_061984586
LinkDB
All DBs
Position
9:complement(9517032..9531068)
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AA seq
343 aa
AA seq
DB search
MANLPQSLSMNTPFGGPSASNPAAAGAPANKDRKMASAEHLVLDLSNPDLRENALLELSK
KRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNLSPAQSNRVCNALALLQCVASHP
DTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTEII
PLCLRTMEMGSELSKTLGSHHFLSPRKDSPLNHYLHQTKKVATFIVQKILLDDVGLDYIC
TTAERFFAVGRVLGNMVSALAEQPSSRLLKHIIRCYLRLSDNPRACHALRSCLPDMLRDA
TFSSCLREDPTTRRWLQQLLHNVGGNRVPGLQAGGGFDHMLVN
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaccttcctcaatctctgtcgatgaacacacctttcggaggaccaagcgcgtct
aatcccgccgccgctggagctcccgccaacaaagaccggaagatggcatcagcagagcac
ctggttcttgacctaagcaatcctgatcttcgtgaaaacgcccttcttgagctctctaag
aagagagaattatttcaagatttggcaccattgttgtggaattcttttggtacaattgct
gcattgttacaggagatcgtttcaatatacccagttttatcaccacctaacttgagtcct
gcacaatcaaatcgagtttgcaatgctctagcacttcttcagtgtgtagcttcacatcct
gacacaaggatgttgtttctcaatgctcatatacctttatatctctaccctttcctaaat
acaactagcaaatcaaggcctttcgagtacctaaggctcactagtttaggtgtcattggt
gccctagtgaaggttgatgacacagaagttattagtttccttctttctactgagattatt
ccgctatgtctgcgtactatggagatgggaagtgaattatcaaaaacattaggatcgcat
catttcctctctcctcgaaaggattctcccttgaatcattacctacatcaaacaaaaaag
gttgccacatttatagttcaaaagattttattagatgatgtgggcctggattacatttgc
accacagcagaacggttttttgcagtgggccgggttttggggaacatggtttcagcactt
gctgaacaaccctcgtcacggttattaaaacatatcatccgatgttatcttcgcctttca
gataatccaagggcttgtcatgcattacgaagttgcctgccagacatgctgagagatgct
accttcagtagctgccttcgtgaagatccaacaacaaggcgatggctgcaacagttgctt
cacaatgtcggagggaatcgggttccaggacttcaggctgggggaggatttgatcatatg
ctggtgaactaa
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