KEGG   Populus nigra (Lombardy poplar): 133703943
Entry
133703943         CDS       T10372                                 
Name
(RefSeq) suppressor of mec-8 and unc-52 protein homolog 1
  KO
K13111  WD40 repeat-containing protein SMU1
Organism
pnz  Populus nigra (Lombardy poplar)
Brite
KEGG Orthology (KO) [BR:pnz00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pnz03041]
    133703943
Spliceosome [BR:pnz03041]
 Complex B
  Other components
   Complex B specific factors
    133703943
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40 Beta-prop_THOC3 Beta-prop_WDR3_1st WD40_Prp19 WD40_WDHD1_1st Beta-prop_WDR36-Utp21_2nd WDR55 Beta-prop_EML_2 WD40_CDC20-Fz EIF3I Beta-prop_WDR3_2nd Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd Beta-prop_WDR36-Utp21_1st ANAPC4_WD40 WD40_Gbeta LisH_TPL Beta-prop_WDR90_POC16_2nd Beta-prop_EML NBCH_WD40 Beta-prop_WDR75_1st Beta-prop_Aladin WDR90_beta-prop_4th Beta-prop_TEP1_C Beta-prop_IFT122_1st Beta-prop_DCAF4 Beta-prop_ACSF4 Beta-prop_NWD2_C Beta-prop_WDR41 Beta-prop_RIG_2nd Beta-prop_VPS8 Ge1_WD40 Beta-prop_EIPR1 Beta-prop_IFT140_1st Beta-prop_SPT8 WD40_RFWD3 Beta-prop_SCAP Beta-prop_Nup120_160 WD40_MABP1-WDR62_1st Beta-prop_Vps41 Beta-prop_WDR35_TULP_N Beta-prop_NUP159_NUP214 Beta-prop_HPS5 DUF7165 Beta-prop_WDR75_2nd VPS8_N Beta-prop_LRRK2 PROPPIN Beta-prop_IP5PC_F Beta-prop_IFT122_2nd WD_LRWD1 zf_topless 7TMR-HDED
Other DBs
NCBI-GeneID: 133703943
NCBI-ProteinID: XP_061984674
LinkDB
Position
9:complement(17043234..17049362)
AA seq 512 aa
MALEIEARDVIKIVLQFCKEHSLHQTFQTLQNECQVSLNTVDSIETFVADINGGRWDTIL
PQVAQLKLPRNKLEDLYEQIVLEMIELRELDTARAILRQTQAMGVMKQEQPERYLRLEHL
LVRTYFDPNEAYQESTKEKRRAQIAQALAAEVSVVPPSRLMALIGQALKWQQHQGLLPPG
TQFDLFRGTAAMKQDIDDMYPTTLTHTIKFGTKSHAECAKFSPDGQFLVSCSIDGFIEVW
DYVSGKLKKDLQYQADETFMMHDDPVLCVDFSRDSEMLASGAKDGKIKVWRIRTGQCLRR
LERAHSQGVTSLAFSRDGSQLLSASFDSTARIHGLKSGKLLKEFRGHASYVNDAIFTSDG
TRVITASSDCTVKVWDMKSTDCIHTFRPPPPLRGGDASVNSVHLFPKNTDHIVVCNKTSS
ICIMTLQGQVVKSFSSGKREGGDFAAACLSPKGEWIYCVGEDRNIYCFSYQSGKLEHLMK
VHEKDVIGVTHHPHRNLLATYSEDSTMKLWKP
NT seq 1539 nt   +upstreamnt  +downstreamnt
atggcactcgaaatcgaagctcgcgatgtaataaaaattgtgctgcagttctgcaaagaa
cactctctgcaccaaacattccaaaccctacaaaacgaatgtcaagtctccttaaacaca
gtagacagcattgaaacattcgtggcagacataaacggaggaagatgggacacgatcttg
cctcaagtggcgcaacttaagttgccgaggaataagttagaagatttgtacgaacagatt
gtgttagaaatgattgagttacgagaattggatactgctcgtgctattttaagacagact
caagctatgggtgtcatgaagcaggaacagccggagagatatttgaggctcgagcatttg
cttgttagaacttattttgatcctaatgaggcttatcaagaatcaaccaaggagaaacga
cgtgcacagattgctcaagcccttgctgcagaagttagtgtggttccaccttcaagatta
atggctctaattggtcaggctctcaagtggcagcaacaccaagggttgcttcctccggga
actcagtttgatctattccgaggaacagcagccatgaaacaagatattgatgatatgtac
ccaacaactcttacacataccataaagtttggaacaaaaagtcatgctgaatgtgctaaa
ttctctccagacgggcaattccttgtttcatgttctattgatgggttcattgaggtgtgg
gattatgtaagtggaaagctcaaaaaggatcttcagtaccaggctgatgaaacttttatg
atgcacgatgatcctgtcctctgtgttgattttagccgagattctgagatgcttgcatct
ggagcgaaagatgggaagatcaaagtctggcgtataaggactggtcaatgcttgcgtcgt
cttgaacgtgcacattctcagggagtcacaagtcttgctttctctcgtgatggaagccag
ctgctaagtgcatcctttgacagcacagcgagaattcatggcctaaaatctgggaagttg
ttaaaagaattccgtgggcacgcatcctatgtgaatgatgccatcttcactagtgatggg
actcgtgttattactgcctccagtgattgcacggtcaaggtttgggatatgaagagtaca
gactgtatacatacgttcaggccaccaccgccattgaggggaggtgatgcttctgtgaac
tctgttcatcttttcccaaaaaacactgatcatattgttgtatgtaacaagacatcatcg
atatgcattatgacacttcaaggacaggttgtgaagagcttttcttccggtaaaagagaa
ggtggagattttgctgcagcctgtttatcaccaaaaggggaatggatctactgtgttggt
gaagacaggaatatttactgcttcagctaccaatctggcaaactagagcatctaatgaag
gttcacgagaaggatgtaataggcgtgacccatcatcctcataggaatcttcttgccacc
tacagcgaagattccacaatgaaattatggaagccatga

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