Populus nigra (Lombardy poplar): 133704437
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Entry
133704437 CDS
T10372
Name
(RefSeq) E3 ubiquitin-protein ligase RHF1A-like isoform X1
KO
K19043
E3 ubiquitin-protein ligase RHF [EC:
2.3.2.27
]
Organism
pnz Populus nigra (Lombardy poplar)
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pnz04121
]
133704437
Enzymes [BR:
pnz01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
133704437
Ubiquitin system [BR:
pnz04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
133704437
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Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-rbx1
zf-RING_UBOX
zf-C3HC4_2
zf-C3HC4
zf-RING_5
zf-ANAPC11
zf-Nse
zf-RING_Vps41
Motif
Other DBs
NCBI-GeneID:
133704437
NCBI-ProteinID:
XP_061985241
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Position
10:6401601..6405000
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AA seq
406 aa
AA seq
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MASFTSLSSSMSDAPMILVPAYSSSSSSLGAGVEDAFEDDACSICLDPFTPQDPATDTCC
KHEYHLQCIVEWSQRSKECPICWQLLVLKDPASQELLAAVETERLFRSRNSNPASMIVHH
LDEDYDVEQDSYSDDSDFDDHVMQHLSASAASRARYVCKRERHRSTGLGPSQGLVFTSPE
HVSTVQQTCTSPEEGQMLSYGSSVINSSTPGTPSVKIQNLSSVAPPVVNQVSTTAVNSPF
KPRILFRQPPIDPPQGQGSSDMLSLSESIKSKWFAASARYKESLSKGTRGMKEKLLARNN
SVKELSKEVQREMSAGIAGVARMIERLDLTSKRTGPSMSDSDFTRGASNFSWKGKGVEQN
IIAQALAKQSEEIAHDTSLGASSHASATVPAQVEISHTQVWKPLKF
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atggcgagttttacttcgctttcctcttcaatgtctgacgctccaatgatcttagttccc
gcgtattcatcttcttcttcttctttgggagctggagtcgaggatgctttcgaagacgac
gcctgcagtatttgcctcgatcctttcacccctcaagaccctgctactgatacctgctgc
aaacatgaatatcatcttcagtgtattgttgaatggtcacagagaagcaaagagtgcccg
atatgctggcagcttcttgtactgaaagaccctgccagccaagagcttctagctgctgtt
gagactgagaggcttttcaggtcaaggaactctaaccctgcgtccatgatcgttcatcat
ttggatgaagattatgatgtagagcaggattcctattcagatgactctgatttcgacgat
catgttatgcagcatctatctgcttctgctgccagcagagctcgttatgtttgcaaaagg
gagaggcataggtctaccggacttggtccctcccagggtcttgtctttacctctcctgaa
catgtatccactgttcagcaaacatgcacttcaccagaagaaggtcaaatgttaagttat
gggtcatcagtgattaattcatcaactcctggtacaccatcagttaaaattcaaaatttg
tcatccgtggcccctcctgttgtgaaccaagtctctaccactgctgtcaatagccctttt
aaacccaggattctctttagacagccaccaattgatcctccccaggggcaagggtcatca
gatatgttatctctctcagaatctattaaatctaaatggtttgctgcttcagccaggtac
aaggaatcactttcaaaaggtaccagaggtatgaaggaaaagctacttgcaaggaataat
tcagttaaggagctgagcaaagaagttcagagggagatgagtgcaggcattgctggtgtt
gcacgaatgattgagcgcttggatcttacttcaaaacgcactggaccctccatgtctgat
tctgattttactaggggggcatcaaatttctcctggaagggtaagggtgtggaacagaac
atcattgctcaggctttggccaaacaaagtgaggaaattgctcatgatacaagtttaggt
gcttcctcgcatgcctctgctactgtcccagcccaagtggaaatctcccacacgcaggtt
tggaaaccactgaagttttaa
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