Populus nigra (Lombardy poplar): 133704466
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Entry
133704466 CDS
T10372
Name
(RefSeq) elongation factor 1-alpha-like
KO
K03231
elongation factor 1-alpha
Organism
pnz Populus nigra (Lombardy poplar)
Pathway
pnz03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
133704466
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pnz03019
]
133704466
03016 Transfer RNA biogenesis [BR:
pnz03016
]
133704466
03012 Translation factors [BR:
pnz03012
]
133704466
04131 Membrane trafficking [BR:
pnz04131
]
133704466
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pnz04147
]
133704466
Messenger RNA biogenesis [BR:
pnz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
133704466
Transfer RNA biogenesis [BR:
pnz03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
133704466
Translation factors [BR:
pnz03012
]
Eukaryotic type
Elongation factors
133704466
Membrane trafficking [BR:
pnz04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
133704466
Exosome [BR:
pnz04147
]
Exosomal proteins
Proteins found in most exosomes
133704466
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
GTP_EFTU_D4
AAA_22
Motif
Other DBs
NCBI-GeneID:
133704466
NCBI-ProteinID:
XP_061985277
LinkDB
All DBs
Position
10:complement(14183943..14186435)
Genome browser
AA seq
449 aa
AA seq
DB search
MGKEKSHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL
DKLKAERERGITIDIALWKFETTRYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT
GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIIKEVSSYLKK
VGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQIQEPKRPSDKPLRLPLQD
VYKIGGIGTVPVGRVETGVIKPGTVVTFGPTGLTTEVKSVEMHHEALQEALPGDNVGFNV
KNVAVKDLKRGFVASNSKDDPAKEAANFTSQVIIMNHPGQIGNGYAPVLDCHTCHIAVKF
AEILTKIDRRSGKELEKEPKFLKNGDAGMIKMIPTKPMVVETFSEYPPLGRFAVRDMRQT
VAVGVIKNVEKKDASSAKVTKSAAKKGGK
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaagagaagtcgcacatcaacatcgtggtcattggccatgtcgactctggaaag
tcgaccaccactggtcacttgatctacaagcttggaggtattgacaagcgtgtcatcgag
aggttcgagaaggaagctgctgagatgaacaagaggtcattcaagtatgcttgggtgctc
gacaagctcaaggctgagcgtgaacgaggtattaccattgatattgctctgtggaagttc
gagaccaccaggtactactgcactgtcattgatgctcctggacatcgtgactttataaag
aacatgattaccggaacctcccaggctgactgtgcagtcctcatcattgactctaccact
ggtggttttgaggctggtatctccaaggatggtcagacccgtgagcatgctcttcttgcc
ttcacccttggtgtaaagcaaatgatctgctgctgtaacaagatggatgccaccactcct
aaatactccaaggctaggtatgatgaaattatcaaggaagtgtcatcctatttgaagaaa
gtcggttacaaccctgacaagattcccttcgtgcctatctctggatttgagggtgataac
atgattgagaggtccaccaacctggactggtacaagggaccaactctcctcgaagccctc
gaccagatccaggagcccaagaggccctcagacaagcccctccgtctcccacttcaggac
gtgtacaagattggtggtatcggaactgtcccagtgggtcgtgtggaaactggtgtcatc
aagcctggtacggttgtcactttcgggccaactggactgactactgaagttaagtcggtt
gagatgcaccacgaagcactccaagaggctcttcccggtgacaatgttggattcaatgtt
aagaatgttgccgtgaaggatctgaagcgtggttttgttgcctcaaactcgaaggatgat
cccgccaaggaggctgcaaacttcacctcccaggtgatcatcatgaaccatcctgggcag
attggaaatggttacgcccctgttcttgactgccacacctgtcacattgctgtcaaattt
gctgagatcctcaccaagattgacaggcgatccgggaaggagttggagaaggaacctaaa
tttctgaagaacggtgatgctggtatgattaagatgattcccacgaagcccatggtggtg
gagactttctcagagtatcccccacttggtcgttttgccgtgagggatatgcgccagact
gttgctgtgggagtgatcaagaacgtggagaagaaggatgcttctagtgctaaggtgacc
aaatccgctgccaagaagggtggcaagtga
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integrated database retrieval system