Populus nigra (Lombardy poplar): 133704632
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Entry
133704632 CDS
T10372
Name
(RefSeq) nuclear poly(A) polymerase 3 isoform X1
KO
K14376
poly(A) polymerase [EC:
2.7.7.19
]
Organism
pnz Populus nigra (Lombardy poplar)
Pathway
pnz03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
133704632
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pnz03019
]
133704632
Enzymes [BR:
pnz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
133704632
Messenger RNA biogenesis [BR:
pnz03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Poly(A) addition factors
133704632
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Ortholog
Paralog
GFIT
Motif
Pfam:
PAP_NTPase
PAP_central
NTP_transf_2
MTPAP-like_central
PAP_RNA-bind
UbiA
Motif
Other DBs
NCBI-GeneID:
133704632
NCBI-ProteinID:
XP_061985499
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All DBs
Position
10:complement(10010092..10014837)
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AA seq
495 aa
AA seq
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MEDERSLSLLKLMVNEGLFPSPEEDEKRKIIVEKLKTIVVAWAKKVAWQRCLPKQQIAAT
SAAILTYGSYGLGVHDPESDIDALCVGPFFATIAEDFFIVLHNILKSRPEISEIHCVKDS
KVPLMRFTFDGISVDLPYAQLKVLNVPENVDILNLSLLTNIDETSWKSLSGVRANQRILL
LVPNLKNFQSMLRCLKLWAKRRGVYGNLNGFLGGVHLAVLAAFVCQNQPSASVIALISNF
FSTYAMWPWPTPVMLQDGMPSNVEDVIETRFYMPIRLPCSPYEYCHSNVTKSTFTKIRAE
FLRGHSMTRDLLKLKLDSDVGRIFEPFPYSTNYTRFVKIYLSAPDQDELGDWVGWVKSHF
RCLLLKLEAVQGFCDPNPVEYVDMDASEPNVVFYWGLNRSRSNFVYIEPVEEDFSRSIYC
GYNGIRGKMELSIVQASELPKNARFDSGNGKKMKACWKMLDYNQRRTPAYSQHLPSYFVG
YVESNGDTEHPSTGG
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atggaggacgaaaggtctctctcgcttctcaagttaatggttaatgaaggattattccca
tctccagaagaagacgagaagaggaagattattgtcgagaagctcaaaacaattgtggta
gcgtgggctaagaaggtggcgtggcagcggtgtttaccaaaacaacaaattgcagctaca
tctgctgctatattgacttatggatcctatggacttggagttcatgatccagagtctgat
attgatgctttatgtgttggtcctttcttcgccactatagctgaggacttttttattgtt
ttgcacaacatacttaagagcaggcctgaaatatcagaaatccattgtgtgaaggattca
aaggttcctttgatgcggtttacatttgatgggatttcagttgatcttccatatgctcag
cttaaagtcttaaatgttcctgaaaacgtggacatcctcaatctatcccttttgactaat
attgacgagactagttggaagagtttgtctggagtacgtgctaatcaacggatactgctg
cttgttccaaacctgaagaatttccaatccatgctgcgatgtcttaaactgtgggcaaaa
cggcgaggagtgtatggtaatctaaatgggtttctgggaggagtgcatttagcagttcta
gcagcctttgtttgtcaaaatcagcctagcgccagtgtaattgctttaatttcaaacttc
tttagtacatatgcgatgtggccttggcctacacctgttatgctccaagatggaatgcca
tcaaatgtggaagatgtgattgagactcgattctacatgcctattcgtttgccatgtagt
ccatacgagtattgccattccaatgtcactaaaagcacattcaccaagatcagagcagag
tttctcagagggcattctatgactagggatcttctaaagttaaagctggactctgatgtg
gggagaatttttgagcctttcccatactcaacgaactatacacgatttgtcaaaatctac
ctttcagctcctgatcaagatgagctaggagactgggtgggctgggtgaagtcacacttc
cgctgtctacttcttaagctggaagccgtgcagggcttttgtgaccccaaccccgtggaa
tatgttgatatggatgcatctgaaccaaatgttgttttctactggggcctaaatcgcagt
agaagcaatttcgtgtatatagaacctgttgaggaggatttctcgaggagtatatactgt
ggctataatggcattcgtggaaagatggaattatctatcgtgcaagcatctgaactacca
aagaatgctcggtttgacagtggaaacggcaagaaaatgaaagcatgctggaagatgctt
gactacaatcaaaggaggaccccagcatattcgcaacatctgccaagctactttgttggg
tatgtggaaagcaatggagacaccgagcacccaagtactgggggctaa
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