Populus nigra (Lombardy poplar): 133704661
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Entry
133704661 CDS
T10372
Name
(RefSeq) ubiquitin C-terminal hydrolase 12-like isoform X1
KO
K11838
ubiquitin carboxyl-terminal hydrolase 7 [EC:
3.4.19.12
]
Organism
pnz Populus nigra (Lombardy poplar)
Pathway
pnz03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
133704661
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pnz01002
]
133704661
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pnz04121
]
133704661
Enzymes [BR:
pnz01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
133704661
Peptidases and inhibitors [BR:
pnz01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
133704661
Ubiquitin system [BR:
pnz04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
133704661
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
USP7_ICP0_bdg
UCH
USP7_C2
MATH_2
MATH
UCH_1
Malt_amylase_C
Nitroreductase
Motif
Other DBs
NCBI-GeneID:
133704661
NCBI-ProteinID:
XP_061985548
LinkDB
All DBs
Position
10:complement(16074484..16087147)
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AA seq
1116 aa
AA seq
DB search
MTLMTPPPLNQQEDDEMLVPQTEFADGPQPMEVAQAETATAVDAQTVDDPPSARFTWTID
NFSRLNAKKLYSDVFVVGGYKWRILIFPKGNNVDHLSMYLDVADSATLPYGWSRYAQFSL
TVINQLHQKYSIRKDTQHQFNARESDWGFTSFMPLGELYDPGRGYLVNDTCVVEADVAVR
KVIDYWSHDSKKETGYVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTENDIPSGSI
PLALQSLFYKLQYSDTSVATKELTKSFGWDTYDSFMQHDVQELNRVLCEKLEDKMKGTVV
EGTIQQLFEGHHMNYIECINVDYKSTRKESFYDLQLDVKGCRDVYASFDKYVEVERLEGD
NKYHAEQHGLQDARKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPLQLDLDRE
NGKYLSPEADRSVRNLYTLHSVLVHSGGVHGGHYYAYIRPTLSDQWFKFDDERVTKEDIK
RALEEQYGGEEELPQTNPGFNNSPFKFTKYSNAYMLVYIRESDKEKIICNVDEKDIAEHL
RIRLKKEQEEKEQKRKEKAEAHLYTIIKVARSEDLLEQIGKDVYFDLVDHDKVRSFRIQK
QITFNLFKEEVAKEFGVPVQLQRFWLWAKRQNHTYRPNRPLTPQEEAQSVGQLREVSNKA
NNAELKLFLEVEIGQDLRPVPPPEKTKEDILLFFKLYDPSKEELRYVGRLFVKGSGKPLE
ILTKLNEMAGFAPDQEIELYEEIKFEPNVMCEHIDKRLTFRSSQLEDGDIVCYQKPPPMG
SDEQCRYPDVPSFLEYMHNRQVVRFRSLEKSKEDEFCLELSKLHTYDDVAERVAHHLGLD
DPSKIRLTSHNCYSQQPKPQPIKFRGVDHLSDMLVHYNQTSDILYYEVLDIPLPELQGLK
TLKVAFHHATKDEVVIHTIRLPKQSTVGDVISDLKAKVELSHPSAELRLLEVFYHKIYKI
FPHNEKIENINDQYWTLRAEEVPEEEKNLAPHDRLIHVYHFMKDTTQNQVQVQNFGEPFF
LVIHEGETLTEVKMRIQKKLQVPDEEFSKWKFAFLSLGRPEYLQDSDIVSSRFQRRDVYG
AWEQYLGLEHSDNAPKRSYAANQNRHTFEKPVKIYN
NT seq
3351 nt
NT seq
+upstream
nt +downstream
nt
atgactctcatgactcctcctccgttaaatcaacaagaagacgacgagatgttggtccca
caaactgaatttgctgatggacctcagccaatggaagtagcacaagccgaaactgcaaca
gcagttgatgcacagacggtggatgatccaccatctgctaggtttacatggacgattgat
aatttttcgaggctaaatgctaagaagctctactctgatgtttttgttgttggaggctac
aagtggcggatattgatttttccaaagggtaacaatgtggatcatttatccatgtatcta
gatgttgctgattcagcaactttgccatatggctggagtcgatatgcgcagtttagcttg
actgttatcaatcaacttcatcaaaagtactcaattcggaaagacacacagcaccagttc
aatgcacgtgagagtgattgggggttcacttcattcatgcctctgggggaattgtatgac
cctgggagagggtatcttgtaaatgacacgtgtgtggttgaagctgatgttgctgttcgt
aaggtcattgattactggtcacatgattcgaagaaggagaccggttatgttggtctaaag
aaccaaggagctacatgctacatgaactctctccttcagacgctgtatcatattccttat
ttcagaaaggctgtatatcatatgccaacgactgagaatgatatcccatcagggagcatt
cctctggctttgcagagtttgttttataaacttcaatacagtgacactagcgtagctaca
aaagagttgacaaagtcttttggctgggatacatatgactctttcatgcagcatgatgtc
caagaacttaatagggttctgtgtgaaaagcttgaagataaaatgaagggaactgttgtg
gagggcactatacaacagctatttgaagggcaccatatgaattatattgaatgcatcaat
gttgactataagtcaacaagaaaggagtcattttatgatcttcagcttgatgtcaaaggc
tgtcgggatgtttatgcttcttttgataagtatgtggaggtggaacgtcttgaaggtgac
aataaatatcatgctgaacaacatggattacaggatgctagaaagggtgtcctattcatt
gacttccccccagttctccaacttcaacttaaaaggttcgagtatgattttatgcgggat
acaatggtgaagataaatgatcgctatgagttccctttgcaacttgatcttgatagagag
aatgggaaatatttatcaccagaggctgaccgcagtgtccgcaatctatacacccttcac
agtgttttggttcacagtggtggtgtgcatggtggacactactatgcttatatcagacca
actctctcagatcagtggttcaaatttgatgatgagcgggtgaccaaagaggatatcaaa
agggcattagaggagcagtatggtggtgaggaagagttaccacagacaaatcctggcttc
aacaactctcccttcaagtttacaaagtactcaaatgcttatatgcttgtgtatattcgt
gaaagtgacaaggaaaaaataatctgtaatgtggacgagaaggacattgcagagcacctc
aggataagattgaagaaagaacaggaggaaaaggagcaaaagagaaaggaaaaagcggag
gcgcacttgtacaccataataaaggttgcacgcagtgaggatctacttgaacagattggc
aaggatgtatattttgatcttgtggatcatgacaaagtacgaagtttccgtatccagaaa
cagataaccttcaaccttttcaaggaagaagttgctaaagaatttggtgtaccagtgcaa
cttcaacgtttttggctgtgggcaaagcgacaaaatcatacataccgtccaaatcggcca
ctgactcctcaggaggaagcacagtctgttggacaattgagagaggtttctaataaggca
aataacgcggagctaaagctgtttctggaagtagaaattggacaggatttgcgacctgtt
cctccacctgagaagactaaagaggatatccttcttttctttaaactttatgatccatcg
aaggaggaactccggtatgtagggaggctgttcgtaaagggtagcggcaagccgttggag
atcctgacaaaactaaatgaaatggctggctttgctcctgaccaggagattgaactttac
gaggaaataaagtttgaacctaatgtcatgtgtgaacacattgacaagaggctcactttt
cgttctagtcagcttgaagatggagatattgtttgctatcagaaaccccctccaatggga
agtgacgaacagtgccgttaccctgatgtgccttccttccttgagtacatgcacaatcgc
caggtcgttcgttttcgatctttggagaaatcgaaagaggatgaattctgtcttgagctt
tcaaagctccacacttatgatgatgttgcggaaagagtagctcaccatcttggcttggat
gacccatccaaaattaggcttacatctcataactgttactcccagcaacctaaaccccag
cccatcaagttccgaggagtggatcatttgtctgacatgctggtgcactacaatcagaca
tctgatattctatactatgaagtattagacatccctctaccagaattgcaaggccttaaa
acattaaaagttgcttttcatcatgctactaaggatgaggtagtgattcataccattaga
ctgccaaaacagagcactgtaggtgatgtcattagtgaccttaaggcaaaggtggagctg
tctcatcctagtgctgaacttagattgcttgaggttttctatcacaagatctacaagatc
tttccacacaatgaaaaaattgagaacattaatgatcaatactggacactacgtgcagag
gaggttcctgaagaagagaaaaaccttgctcctcacgatcgcttgattcatgtctatcat
ttcatgaaagacacaactcaaaaccaggtgcaggttcagaattttggagaaccatttttc
ctggtcattcacgagggtgagactttgactgaagtcaaaatgcgcatacagaaaaaattg
caggttcccgatgaagaattttcaaagtggaagtttgcttttttgtctctaggtcgccct
gagtaccttcaagattcagacatcgtgtccagccgttttcagagaagggatgtttatggt
gcttgggagcagtatcttggattggagcattctgacaatgctcctaaaaggtcatatgct
gctaatcagaatcgtcatacatttgagaagccggtaaaaatctacaactag
DBGET
integrated database retrieval system
