Populus nigra (Lombardy poplar): 133704689
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Entry
133704689 CDS
T10372
Name
(RefSeq) probable starch synthase 4, chloroplastic/amyloplastic isoform X1
KO
K00703
starch synthase [EC:
2.4.1.21
]
Organism
pnz Populus nigra (Lombardy poplar)
Pathway
pnz00500
Starch and sucrose metabolism
pnz01100
Metabolic pathways
pnz01110
Biosynthesis of secondary metabolites
Module
pnz_M00854
Glycogen biosynthesis, glucose-1P => glycogen/starch
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
133704689
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
pnz01003
]
133704689
Enzymes [BR:
pnz01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.21 starch synthase (glycosyl-transferring)
133704689
Glycosyltransferases [BR:
pnz01003
]
Polysaccharide
Storage polysaccharide
133704689
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_transf_5
Glyco_transf_4
Glycos_transf_1
Glyco_trans_1_4
Glyco_trans_4_4
DUF2388
CEP162_coil_mid
DUF6231
Kazrin
HOOK
COG4_N
Flg_hook
Motif
Other DBs
NCBI-GeneID:
133704689
NCBI-ProteinID:
XP_061985590
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All DBs
Position
1:13914275..13925068
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AA seq
1066 aa
AA seq
DB search
MATKLSTCFLSHRHATALNCNAITTTTNDPKHTNVRFLLPCHRLLSSSSFRIRNRNSRSS
QYKRRQMKKSSSTEDSESHQPQPQPQPQPPPTVFSAVPNDVTGASVLLDSETSTSVDVER
IEQLTDAQNPQRLTVSQEAKSLAIDVNIEEDEKHSSASDQMKQLAVNMGGGEQLSSIQIE
DLIGMIRNAEKNTLLLNKARVFALDDLERIFHEKDKLQGEINVLEMRLAENDAKMKVAAQ
EKIRVELLEAQLEKLRNELAQRGATERSVFDLYESQNNFFNKEAPLLQNNTLLQNSSVHS
LSEELSLLRSENMSLKNDIEALREELSNVKNTDERVAILVKQHSLMKSSLQDLESKLIAS
EEDVSKLSSLKVECKDLWEKVDTLQALLDKATKRADQAILVLQQNQDLRKKVDKLEESLE
EAVVYKLSSEKLQQYNELMQQKMKLLEEHLQRSDEEIHSYVRLYQDSVQEFQDTLKSLKE
ESNKRALDEPIDDMPWEFWSHLLLIIDGWLLEKKISTDDAKLLREMVWKRDGRICEAYME
SREKNEREAVSRFLKLTSSPKSSGLSIIHIAAEMAPVAKVGGLGDVVTGLCKALQKRGHL
VEIVLPKYDCMQYDRIHNLRVLDVVVESYFDGKLYKNKIWVGTVEGLPVYFIEPQHPEKF
FWRGQFYGEHDDFRRFSFFSRAALELLLQSGKKPDIIHCHDWQTAFVAPLYWDLYAPKGL
NSARICFTCHNFEYQGTAPASELASCGLDVHQLNRPDRMQDNSAHDRVNPVKGAVVFSNI
VTTVSPTYAQEVRTAEGGKGLHSTLSFHSKKFVGILNGIDTDAWNPATDTSLKVQYNVND
LQGKTENKIALRKFLGLSNADVRQPMVGCITRLVPQKGVHLIRHAIYRTLELGGQFVLLG
SSPVAHIQREFEGIANHFESHHHIRLILKYDESLSHSIFAASDIFIIPSIFEPCGLTQMI
AMRYGSIPIVRKTGGLNDSVFDVDDDTVPPQFRNGFTFSTPDEHGVNSALDRAFNYYRNN
TEVWQQLVQKDMNMDFSWELSTSQYEELYLKSVARARVAANRAQGL
NT seq
3201 nt
NT seq
+upstream
nt +downstream
nt
atggcaacgaaactatcaacttgttttctgagccatcgccatgctactgctttaaattgc
aatgctattactactaccactaatgatcccaagcacacaaatgttcgattcttgttgcct
tgtcatcgattactctcatcatcctctttcagaatacggaatcgcaactcgagaagctcg
cagtataagcgtagacaaatgaagaaatcttcttctacagaggattccgagagtcatcaa
ccacaaccacaaccacaacctcaaccccctcctacggtgtttagtgctgtaccaaatgat
gttactggcgctagcgtactcttagattcggaaactagtaccagtgtagatgtggagcgg
attgagcaactcactgatgcacaaaatccacaacgtcttaccgtgtcccaagaagccaaa
tctttggctattgatgttaacatagaggaggatgagaagcattcaagtgcatctgatcaa
atgaaacaattggccgtaaacatgggcggcggagagcaactttcaagtattcaaattgaa
gatttgataggcatgataagaaatgctgagaaaaatactcttcttctcaacaaagctcgg
gtttttgcgcttgatgaccttgaaagaatttttcatgagaaggacaagttgcaaggagaa
attaatgttttggagatgagattggcagaaaatgatgctaagatgaaggttgccgctcaa
gaaaagatacgtgtggaactcctggaagcccagttggagaaactaaggaatgaactagct
cagaggggtgctactgagagaagtgtgtttgatctgtatgagagccaaaacaattttttt
aataaggaagcccctctacttcagaataacactctacttcagaatagcagtgttcattct
cttagtgaggagcttagtttattgaggtcggagaatatgtctctgaaaaatgatatagaa
gcactcagggaagagcttagtaatgtcaagaataccgatgaacgtgttgcaatactggtg
aagcaacactctttgatgaagtcttctctgcaagacctggagtccaaactaatagcttct
gaggaagatgtttcaaaattatctagtctaaaagttgaatgcaaggacttatgggagaag
gtggatactttgcaagcactgctagataaggcaaccaagcgagcagatcaggctattctt
gtgttgcagcaaaaccaggatctccgaaagaaggttgataaattggaagaatccctggaa
gaagccgttgtttataagctatcatcagaaaagttgcagcaatataatgaactaatgcag
caaaagatgaaactattggaggagcacctccagaggtctgatgaagagatacattcttat
gtccgattgtatcaagattctgtacaagaatttcaagatacactcaagagtttgaaagag
gaaagcaataaaagggcactggatgaacctatagatgatatgccctgggaattttggagt
catttactgctcataattgatggttggctgctcgagaagaaaatatctacagatgatgca
aagcttttgagagaaatggtatggaagagagatgggcgtatttgcgaggcatacatggaa
agcagagaaaagaatgaacgtgaagctgtgtctaggtttctcaagctgacatcatcaccc
aaaagttctggattatctatcattcatattgcagcagagatggcaccagttgccaaggtt
ggtggtttgggagacgtcgtgactggtctatgtaaagcactacaaaagagaggacacctt
gtggagattgttctgcctaaatatgattgcatgcaatatgatcggattcacaacttgagg
gtcctagatgtggtggtggaatcatattttgatggcaaattatacaaaaataaaatatgg
gttggaacagttgaaggtctcccagtttactttattgagcctcagcaccctgagaagttc
ttttggagaggacaattttatggagagcatgatgatttcagacgtttttcatttttcagc
cgtgcagcacttgagttacttcttcaatctggcaaaaaaccagatataattcattgtcac
gactggcagacagcttttgttgcaccactctattgggatttatatgccccaaaagggttg
aattcagccagaatatgttttacatgccacaactttgagtaccaagggactgcacctgca
tcagaattggcatcttgtggacttgatgtccatcagctgaatagaccagatcgaatgcaa
gacaactctgcacatgatagggtcaatcctgtcaagggtgcagtggtattctcaaacatt
gtgacaacagtatcacctacctatgcacaagaggtgcggactgctgagggtgggaaaggt
ctccattcgactcttagttttcactccaagaagttcgttggaattcttaacggaattgat
actgatgcatggaatcctgctactgatacttctctcaaagtccagtacaatgttaatgat
cttcaagggaaaactgaaaacaaaatagctttaagaaaatttcttgggctctctaatgca
gatgtcaggcaaccaatggtaggctgcataacacgattggtgccacagaaaggtgtgcat
cttattagacatgcaatataccgaacactggagctgggaggacaatttgtacttcttggt
tcaagcccagttgcacatattcagagggaatttgagggtattgctaaccattttgagagt
catcatcacattcggctgatattgaagtatgatgaatctctctcccattccatttttgcg
gcatctgacatttttatcattccatcgatttttgagccttgtggcctcacacagatgata
gcaatgagatatggttccataccaattgtaagaaaaactggtggtctaaatgacagtgtt
tttgatgttgatgatgatactgtgccgcctcaatttcggaatggctttacattctcgact
cccgatgaacatggagtgaacagtgctttagatcgtgcatttaactactatagaaacaat
accgaggtctggcagcagcttgttcagaaggacatgaacatggatttcagttgggaattg
tcaacatcgcaatatgaagaactttacttgaagtcagtggccagagcaagggtggcagca
aatcgagctcaaggattgtaa
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integrated database retrieval system
