Populus nigra (Lombardy poplar): 133704693
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Entry
133704693 CDS
T10372
Name
(RefSeq) uncharacterized protein LOC133704693
KO
K19022
AP-5 complex subunit beta-1
Organism
pnz Populus nigra (Lombardy poplar)
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pnz03400
]
133704693
DNA repair and recombination proteins [BR:
pnz03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AP-5 complex
133704693
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP5B1_middle
AP5B1_C
Motif
Other DBs
NCBI-GeneID:
133704693
NCBI-ProteinID:
XP_061985591
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Position
10:11205592..11210941
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AA seq
1126 aa
AA seq
DB search
MNPPDKPLPKPLSSQDWESLIEDFQQGGPRHHKWTAPHLLQSLLDQALTSLLKKDFPLKL
PLLLLLEEFSETFFTHETHLNRLLESLRSVIQSPLDGVTISYYLKEQFMVSTTSIFVTVN
ALEKFHPRFIEGLVELLVLVINRPNHSMDRQSRAIACECLRELEKCWPCLLSNIGGHLWS
LCQNERSHACQSYLLLFTSVVFNIVNTKLNVSILNTSVPLVPFNVPQWVLSGGDENGIGS
KEVVVGLNYKELRRAMAFLLESPQVLTPSGMMEFIGMVMPMAVALELQASMLKVQFFWMI
YSFDPLSCHVVLTMYSRFLDVFDGQEGEIFSRLLLISKETHHYLVFRLLALHWLLGLLSK
LMFSGEVGKYKSIFELGLRFYPAVFDPLALKALKLDLLAFYSICLDRLKLESFSGEEVGI
GKSAAKLFEDGLVSVSAFKWLPPWSSETAVAFRAFHKFLIGASSHSDSDPSTTRTLMDST
IFHTLQGMLVDMTLQFQRLVPVIVSYTDRLLGCQKHRWLGERLLQTVDELLLPKVKINYK
LSSYLPIFDRIAENSTIPPRGLLDLLDKFMVFLVEKHGPDTGLKTWSRGSKVLGICRTML
MHHHSSRLFLGLSRLLAFTCLYFPDLEVRDNARIYLRMLICIPGVKLRDMLNLGEQLGIS
PSSHSSSFFNVHSPRQHYQNLKKSRNISAYIHIERTKPLLVKQTWSLSLLPLGDGSAKAG
YLETIRDSEPLVDARDLNGNENLLTAPENERIYQSQEPLRVMDSKISEILEILRRHFSCI
PDFRHMPGFKVRISCHLRFESEPFNHIWGDNSPISQLDGVDGLPAIYATVLKFSSSAPYG
SIPSYRIPCLLGEPPRNDDISGQSVSLDIVPMENGAREEESFRAPVTIDLEPQEPTPGLV
DVSIEANAENGQVIRGQLQSITVGIEDMFLKAIIPSDIAEDEIPAYYSLLFNALWEACGA
PSNIGRETFQLKGQKGVAAISGTRSVKLLEVPADSLIRVTEQYLAPFVVSVIGEPLVNMV
KDGGIICNIIWKDSASDSFLESTTSVTGLESGPLHLTYGEDDESGSSINTSKRNMGCFLV
LIFLPPRFHLLLQMEVSDLSTLVRIRTDYWPCLAYVDDYLEGLFLA
NT seq
3381 nt
NT seq
+upstream
nt +downstream
nt
atgaatccaccagataaaccacttccaaaaccactctcttctcaagactgggaatcccta
atcgaggatttccaacaaggcggtccacgccaccacaaatggactgcaccacacctactc
caatctctcctcgaccaagccctcacttctctcctcaaaaaagacttccctctcaagctt
cctctccttctcctcctcgaagaattctccgaaacgtttttcacccacgaaacgcatctc
aatcgcctcctcgaatctctccgctccgttatacaatcacccctcgacggcgtaaccatc
tcgtattatttaaaagaacaattcatggtaagcaccacttcgattttcgtaaccgtaaac
gcgctcgagaaatttcacccgcggttcattgagggtttggttgagcttctagtgttggtc
attaacaggccaaatcacagtatggataggcaatcacgcgcgattgcgtgcgagtgtttg
cgggaattggagaaatgttggccgtgcttgttgtctaatattggtgggcatttatggagt
ttgtgtcaaaatgagagaagtcatgcttgccaatcttacctgttgttgtttactagtgtt
gtttttaatattgttaataccaagttgaatgtttcgatattgaatacttcggtgccttta
gttccgtttaacgtgccgcaatgggttttgtctggcggggatgagaatgggattgggagt
aaagaggtggttgtggggttgaattataaggagttgaggagagctatggcgtttttattg
gagtctccgcaggttttgacacctagtgggatgatggagtttatagggatggtaatgcct
atggctgtagctttggagttgcaagcgtcgatgttgaaagtgcagtttttttggatgatt
tattcgtttgatcctttgtcgtgtcatgttgttttgacgatgtattctcgttttctggat
gtgtttgatggacaagagggagagattttttctcgattgttgttgatttcgaaggagaca
caccattatttggtttttagattgcttgctcttcattggttgttggggttgttaagtaaa
ttgatgttcagtggagaggttgggaaatataagtcaatttttgagttgggtttgaggttt
tatccagccgtgtttgatccacttgcattgaaagcgttgaagctggatttgcttgccttc
tactctatatgtcttgataggttgaaacttgagagtttttctggtgaggaggtgggtatt
gggaaatctgctgctaagctgtttgaagatggtctggtttctgtttcggctttcaaatgg
ttgcctccttggagttcagaaactgccgtggctttccgtgcatttcacaagttcttgata
ggtgcctcatctcattccgacagtgatccttccaccactagaacactcatggactctacc
atcttccataccttgcaggggatgctagtggacatgacattgcagtttcagagattggtc
cctgtcattgtttcttacactgatcgcttgttaggctgtcaaaagcatcgctggctggga
gagcgcttgcttcagacagttgatgagcttctgcttccaaaagtcaaaataaactataaa
ttgtcttcttacctgccaatatttgacagaattgcagaaaacagtacaatacctcccagg
ggattgttggacctacttgacaagtttatggtttttcttgtcgagaaacacggccctgat
acagggctgaaaacttggtcccggggaagtaaagttcttggcatttgccgaactatgctg
atgcaccaccatagctctagattgttccttgggttatctcgccttcttgcttttacatgt
ctatatttccctgatttggaggttcgtgacaatgcaaggatctacctgcgaatgctgatc
tgtataccaggagtgaagcttcgagacatgctgaacctgggggagcaactcggtatttct
ccatcctcacattccagttctttcttcaatgttcactctcctcgacagcattatcagaat
ctcaagaaatccaggaacatctcagcctacattcacattgagcgaacaaaaccactgctt
gttaagcaaacctggtccttgtccttgttacctttgggtgatgggagtgctaaagctggt
tatctagagaccataagggatagtgaacctttggttgacgcaagagatctgaatggcaat
gaaaatttgctgactgccccagaaaatgaaagaatctatcagtctcaggagccgttacgc
gtaatggattcaaaaatttcggagatcttagaaatattaaggaggcatttctcgtgtatt
cctgattttaggcacatgcctgggtttaaggttagaatatcctgccatttgagatttgaa
tctgagcctttcaatcatatatggggagacaattcacctattagtcagttggatggagta
gatggtcttcctgccatatatgcaactgtccttaaattttcatcctcggcaccatatgga
tctatcccatcatatcgcataccttgtcttctcggtgaacctcccaggaatgatgatatt
tctggccagagtgtttcactagacattgttcccatggaaaatggtgccagagaagaggaa
agcttcagagctcccgtaacaattgatttggaaccacaggaaccaactcctggtctagtt
gatgtttccattgaagcaaatgcagaaaatggtcaggtcattcgtggtcaacttcaaagt
atcactgtaggtatagaggacatgtttctcaaggctattatcccatctgacattgctgag
gatgagatacctgcttattattccctgttattcaatgctctctgggaggcgtgtggtgct
ccttccaacataggacgggagacattccaattaaaggggcagaagggtgttgcagcaatc
agtggaacccgatcagtcaagctacttgaagttcctgcagactctctgatcagggtcact
gagcagtatctggcaccctttgttgttagtgtgattggtgaaccacttgttaacatggtg
aaggatgggggaataatctgcaacatcatatggaaggattctgcatcggattcctttctt
gaaagcaccacgtcagttactggtttagaaagtggcccccttcaccttacctatggtgaa
gacgatgagagtggaagttcaataaatactagtaaaagaaacatgggctgctttcttgta
ttgatatttcttccaccaaggttccatctccttctccaaatggaagtaagtgatctttca
accttggttcgaattagaactgattactggccatgcttagcttatgttgatgattatctg
gagggtttgtttttggcatag
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integrated database retrieval system
