Populus nigra (Lombardy poplar): 133704881
Help
Entry
133704881 CDS
T10372
Name
(RefSeq) katanin p80 WD40 repeat-containing subunit B1 homolog KTN80.3-like isoform X1
KO
K18643
katanin p80 WD40 repeat-containing subunit B1
Organism
pnz Populus nigra (Lombardy poplar)
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pnz04812
]
133704881
Cytoskeleton proteins [BR:
pnz04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
133704881
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Katanin_con80
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
EIF3I
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_EML
ANAPC4_WD40
Beta-prop_SCAP
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_1st
Beta-prop_DCAF4
NBCH_WD40
Beta-prop_EIPR1
Beta-prop_IFT122_1st
Beta-prop_IFT140_1st
Beta-prop_SPT8
eIF2A
WDR90_beta-prop_4th
Beta-prop_HPS5
Beta-prop_IP5PC_F
Beta-prop_Vps41
Beta-prop_VPS8
Beta-prop_WDR19_1st
Beta-prop_DCAF12
Beta-prop_RIG_1st
PROPPIN
VPS8_N
Motif
Other DBs
NCBI-GeneID:
133704881
NCBI-ProteinID:
XP_061985907
LinkDB
All DBs
Position
10:16667731..16677506
Genome browser
AA seq
808 aa
AA seq
DB search
MTTKRAYKLQEFVAHSSSVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTS
GIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGS
LDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHD
FKYHEGQIQCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGTETTGVRCLTFNPDGR
TLLCGLHESLKVFSWEPIRCHDAVDVGWSRLSDLNVHEGKLLGCSYNQSCVGVWVVDISR
IEPYAIGNANRFNSHSESKSGAIGNQSVLLENNAKTSMGRLSVSQNSDVLVKETKSLGRS
AVSQNSVSGNESSKESKILPSAGSVPGTPQRVNLNTGLKTTMTGPLTVSSTAAPKRSSTK
ILSAANVPVLNKADVIPVIVPRTNSRSEQVADFRKEIGIAARTMPFSLQSKTTDFRKFSN
SREDMDQPTTSTQSETTGCKATEPISVMDRNITPAVKASIHGISTAERNIGDDRSMGSGN
YESDSITEPPTSYQEENCETRGHKINRDAPTVESQKGGRMRSLMINWEKRGRSSSYEGPT
SSTSTGTGSVVNVLPLNMFKQRGRTPSIEKETVSAFDEDVIADLMEQHDQFLSSMQSRSA
KLQVVYRYWERNDVKGAIGAMEKMADHAVLSDVISIVADKIDIVNLDICTCLLPLLTNLL
ESHMDRHLSISLDMLLKLVRMFGSMIYSTLSASTSVGVDIEAEQRLERCNICFVELEKVK
RCLLTLTRKGGSVAKHAHELNLALQEVS
NT seq
2427 nt
NT seq
+upstream
nt +downstream
nt
atgactactaaacgcgcctacaagctgcaggaatttgtggcacattcttcgagtgtcaat
tgccttaagattggcaggaaatcatccagggttcttgtgaccggaggagaagatcacaaa
gtcaatctttgggctattggtaagcccaatgctatactgagtttgtccggacatacaagt
gggattgattcggtaagctttgattcttcagaagtccttgtagctgcaggagctgcgagt
ggcacaatcaagctttgggatttagaggaggcaaaaattgttcgcacactcactggccac
agatccaattgcatatctgtagactttcacccttttggagagttctttgcatctggttcc
ctggacacaaatcttaagatatgggatatcagaaagaagggctgtattcacacttacaag
ggccacactcgaggagtgaatgcaatcagatttaccccagatggtcgttgggttgtatct
ggtggagaggacaatacagtaaagctgtgggatttgactgctggaaagctattgcacgat
ttcaagtaccatgagggccagattcagtgcatagattttcatccccacgagtttcttctt
gcaacaggttctgctgacaggactgtaaaattttgggaccttgaaacctttgagctaata
ggttctgctgggacggagacaactggagtgcgttgtttgacctttaatcctgatgggagg
actctactgtgtggattgcatgaaagtttgaaagttttctcatgggaaccaataagatgc
catgacgccgtggatgtgggatggtctaggttgtcagatctcaatgttcatgaaggaaag
cttcttggatgctcatacaatcagagttgtgtaggagtgtgggttgtagatatatcgcgt
attgaaccgtatgcaattggaaacgccaaccgattcaacagtcattcagaatctaaatct
ggtgcaattgggaaccaatcagtcctgcttgagaacaacgcaaagactagcatgggaagg
ttatctgtttcacaaaattctgatgttttagtaaaagaaacaaaatctcttggaaggtcg
gcagtttctcaaaattcagtttctgggaacgagtcttctaaagaatcaaagattttgcca
tccgcaggaagtgtacctggtactcctcaaagagtgaacttaaacactgggttgaagaca
actatgaccggtcctctaacagtttctagcacagcagccccaaagaggagttctacaaag
atcctttcagctgctaatgttccagtcttgaacaaggcagatgtcatacctgtaattgtc
cccagaactaactccagatcagagcaagtagctgacttcagaaaagaaattggtattgct
gctaggacaatgccattttctttgcagtcaaagacaactgatttccggaaattttcaaat
agtagagaggacatggaccagccaactacctctacccagtctgagacaacaggttgcaag
gctacagaaccgataagtgtcatggataggaatattactcctgcagttaaagcctctatt
catggaatatcaactgctgaacgaaatattggggatgatagatctatgggatctggaaac
tatgagtcagattcgataacagagccacccactagttaccaggaagaaaactgtgagact
cgtggacataaaataaacagagatgcacccactgttgagagtcagaaaggaggaagaatg
cgttcacttatgataaactgggagaaaaggggaagatcttctagctatgagggacctact
tccagcacttccactgggacaggatctgtggtgaatgtgctccctcttaatatgtttaaa
cagagaggacgcaccccatccattgaaaaggaaacggtttctgcttttgacgaggatgtt
attgcagacttaatggaacagcatgaccaatttctcagctctatgcagtctcgttctgcc
aagttacaggttgtctacagatattgggagagaaatgatgttaagggggccattggtgca
atggagaagatggctgaccatgctgtcctttctgatgttatcagtatcgtggctgataaa
attgacattgtcaatttggatatatgcacatgtctcctgccacttcttactaacctgctt
gaaagtcacatggataggcatttgagcatttccctggacatgctgctgaagctggtcaga
atgtttggttcaatgatatattcaactctatcagcgtcaacatctgttggtgtggatatc
gaagcagagcaaaggctggaacgttgcaatatctgctttgtagagcttgaaaaagtcaaa
cgctgcctgcttacccttacaaggaaagggggatcggttgcaaagcatgcgcatgagcta
aatctagctcttcaagaagtatcatga
DBGET
integrated database retrieval system
