Populus nigra (Lombardy poplar): 133705172
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Entry
133705172 CDS
T10372
Name
(RefSeq) beta-hexosaminidase 3-like
KO
K12373
hexosaminidase [EC:
3.2.1.52
]
Organism
pnz Populus nigra (Lombardy poplar)
Pathway
pnz00511
Other glycan degradation
pnz00513
Various types of N-glycan biosynthesis
pnz00520
Amino sugar and nucleotide sugar metabolism
pnz00531
Glycosaminoglycan degradation
pnz00600
Sphingolipid metabolism
pnz00603
Glycosphingolipid biosynthesis - globo and isoglobo series
pnz00604
Glycosphingolipid biosynthesis - ganglio series
pnz01100
Metabolic pathways
pnz04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
133705172
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
133705172
00513 Various types of N-glycan biosynthesis
133705172
00531 Glycosaminoglycan degradation
133705172
00603 Glycosphingolipid biosynthesis - globo and isoglobo series
133705172
00604 Glycosphingolipid biosynthesis - ganglio series
133705172
00511 Other glycan degradation
133705172
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
133705172
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
pnz03110
]
133705172
Enzymes [BR:
pnz01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.52 beta-N-acetylhexosaminidase
133705172
Chaperones and folding catalysts [BR:
pnz03110
]
Intramolecular chaperones
Others
133705172
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_20
Glycohydro_20b2
Glyco_hydro_20b
Glyco_hydro_10
Motif
Other DBs
NCBI-GeneID:
133705172
NCBI-ProteinID:
XP_061986283
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Position
10:complement(11603014..11610858)
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AA seq
527 aa
AA seq
DB search
MGLKSAWLVVVFMFLGVAVAKNVNELNVWPMPKWVSRGHSRVYMSQDFQLVTDGSKYIDG
SEILKDGFTRMLDVVKVAHVVDGDLSSVDKSLIIKGIHVLIFSPDDQLQYGVAESYKLLV
PSPEMPDYVHLEAQTVYGALHGLQTFSQLCHFNFTTRLIEVHMVPWTIIDQPRFSYRGLL
IDTSRHYQPVPMIKKVIDSMAYAKLNVLHWHIVDTQSFPLEIPSYPHLWDGAYSVSERYS
FSDAAEIVSYAQRRGINVLAELDVPGHALSWGHGYPSLWPSKDCHQPLDVSNEFTFKVID
GILSDFSKIFKFKFVHLGGDEVDPSCWTKTPHITKWLKEHRMNGSQAYQYFVLRAQKIAL
SHGFEIVNWEETFNDFGNKLSRKTVVHNWLGGGVAEQVVASGLRCIVSNQDKWYLDHLDT
PWEEFYKNEPLTNITNPEQQSLVLGGEVCMWGETVDGSDIEQTIWPRAAAAAERLWTPYD
KLAKDPEKVAGRLAHFRCLLNQRGVAAAPIAGPGRGAPIEPGSCYVQ
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atggggttgaaaagtgcttggttagtggtggtgtttatgtttcttggggttgctgtggca
aagaatgtgaatgagttgaatgtatggccaatgccgaagtgggtgagtagagggcacagc
agggtttacatgagtcaagattttcagttagttactgatgggagcaagtacattgatggc
tctgagattttgaaggatggctttacaagaatgcttgatgtagtgaaagttgctcatgtt
gttgatggtgatctttctagcgtagacaagtctctcatcattaaaggaattcatgttctt
attttctcaccagatgaccagttacaatatggtgttgccgagtcatacaaactgctggtt
ccttcaccagagatgccagattacgtccatcttgaggcgcagactgtttatggggcgtta
catgggcttcagacattcagccaattgtgtcattttaactttacaactagactgattgaa
gttcacatggtcccttggactatcattgatcaaccaagattctcttatcgagggctcttg
attgatacatcaagacactatcagccagtgccaatgattaagaaagtaattgattctatg
gcctatgcaaaattgaatgtgttgcactggcacattgtagatacccaatctttccctttg
gagataccttcatatccacatctgtgggatggggcttattcagtttcagagcggtactcc
ttttctgatgctgctgaaattgtgagttatgctcaaaggcgaggaattaatgtattagct
gaacttgatgttcctggacatgctctctcatgggggcatggctatccttctttatggcca
tcaaaagactgtcatcagccacttgatgtcagcaatgagtttacattcaaagtgatagat
gggattctttcagatttcagtaagatctttaaattcaagtttgttcacttaggaggtgat
gaagttgacccgagttgctggacaaaaactccccacataacaaaatggttaaaagagcat
agaatgaatggatctcaagcttatcagtactttgtcttgcgggcacagaaaatagctttg
tcccatggatttgaaattgttaactgggaggagactttcaatgacttcggaaataaattg
agccgcaagactgtggtgcacaattggcttggaggtggagttgctgagcaagtggttgca
tctgggttgaggtgcattgtgagcaaccaggacaaatggtatctagatcacttggatact
ccttgggaagagttctataagaatgaaccacttacaaatataacaaaccccgagcaacag
agtttagttcttgggggggaagtatgcatgtggggagaaacagtggatgggtcagacatt
gaacaaaccatatggccacgtgctgcagctgctgcagagcggctatggacaccttatgac
aagctagcgaaggatccagaaaaagttgctggaaggttagcacacttcaggtgtttgctg
aatcaaagaggggttgccgcagctcctatagctggaccaggccgaggagcacctatagaa
ccaggttcttgttatgtacagtaa
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