Populus nigra (Lombardy poplar): 133705376
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Entry
133705376 CDS
T10372
Name
(RefSeq) phosphomethylpyrimidine synthase, chloroplastic-like
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
pnz Populus nigra (Lombardy poplar)
Pathway
pnz00730
Thiamine metabolism
pnz01100
Metabolic pathways
pnz01240
Biosynthesis of cofactors
Module
pnz_M00897
Thiamine biosynthesis, plants, AIR (+ NAD+) => TMP/thiamine/TPP
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
133705376
Enzymes [BR:
pnz01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
133705376
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GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-GeneID:
133705376
NCBI-ProteinID:
XP_061986513
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Position
1:complement(23982573..23986718)
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AA seq
638 aa
AA seq
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MASVQAAAILTSSAVTKNGITTAFLPPGFSSASAAACKKDFCARSLASGARATLTFDPPP
ATKQKKNTVDPSSPDFLPLPSFEQCFPKSTKEYREVKHEESGHVLKVPFRRVHLSGDEPS
FDNYDTSGPQNISPRMGLPKLRKEWVDRREKLGTPRYTQMYYAKQGIITEEMLYCAAREK
LDPEFVRSEVARGRAIIPSNKKHLELEPMIVGRNFLVKVNANIGNSAVASSIEEEVYKVQ
WATMWGADTVMDLSTGRHIHETREWILRNSAVPVGTVPIYQALEKVNGIAENLSWEVFRD
TLIEQAEQGVDYFTIHAGVLLRYIPLTAKRMTGIVSRGGSIHAKWCLAYHKENFAYEHWD
DILDICNQYDVALSIGDGLRPGSIYDANDTAQFAELLTQGELTRRAWEKDVQVMNEGPGH
VPMHKIPENMQKQLEWCNEAPFYTLGPLTTDIAPGYDHITSAIGAANIGALGTALLCYVT
PKEHLGLPNRDDVKAGVIAYKISAHAADLAKGHPHAQTWDDALSKARFEFRWMDQFALSL
DPMTAMSFHDETLPSEGAKVAHFCSMCGPKFCSMKITEDVRKYAEEHGYGNAEEAVQHGM
DAMSAEFLAARKTISGEQHGEVGGEIYLPANYISSSER
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atggcatctgtccaagctgctgctattttgacatcctcagctgtaaccaagaatggcatt
accactgcctttttaccacctggattttcgagtgcatcagcagcagcatgcaagaaggat
ttttgcgctcgctctctggcgtcgggagccagagctactttaacattcgatccaccacca
gcaactaagcaaaagaagaacactgtcgatccttcttctcctgattttcttcctcttccc
tcttttgaacaatgttttccaaagagcactaaagaatacagggaagttaaacatgaagaa
tctggtcatgtcctcaaagttccgttccggcgagtccacttgtccggcgatgaaccaagt
tttgataactacgataccagtgggcctcaaaacatcagtccccgcatgggacttcctaag
ctgcgtaaagaatgggttgacaggagggagaagttagggacaccaaggtacactcagatg
tactatgcgaagcagggaattataactgaggagatgctgtattgtgctgctcgtgaaaag
cttgacccggagtttgtgaggtcagaggttgctcgcgggagggctattatcccttccaac
aagaagcatttagagctggagccgatgatcgttggaagaaattttttggttaaagttaat
gcaaatattggaaattctgccgttgcgagctctatcgaggaagaagtttataaggttcaa
tgggcaactatgtggggtgctgatactgttatggatctttccactggtcgtcacattcac
gagacccgggagtggatcttacgtaactctgctgtgccagtaggtactgtgcctatctat
caagcacttgagaaagtaaatggaattgctgaaaatcttagttgggaagtcttcagagac
accctgattgaacaagccgagcagggtgtagattatttcacaattcatgctggggttctg
ctgcggtacatccctttaactgcaaagcgcatgacaggaattgtttcgcgaggaggatca
atccatgcaaagtggtgcttagcttatcacaaggagaactttgcatacgagcattgggat
gacatccttgatatatgcaatcaatatgatgtggccctgtcaattggtgatggactgagg
cctgggtccatatatgatgccaatgacactgctcaatttgcagagcttctaactcaaggg
gaactaactcgtcgggcatgggaaaaggatgtacaggttatgaatgaagggcctggacat
gttccaatgcacaagattcctgagaacatgcaaaaacagctagagtggtgcaatgaagct
cctttctatactcttggacctctaacaactgacattgctcctggatatgaccacatcacc
tctgctattggcgctgccaatattggggctcttggcactgcacttctctgttatgtcaca
ccaaaggagcaccttggactgccaaacagagatgatgtgaaggctggagttatagcgtac
aagatatctgctcatgctgctgatttggcaaaaggtcaccctcatgcgcaaacctgggat
gatgctttaagcaaggcaagatttgagttccgatggatggaccagtttgctctgtcattg
gatcccatgacggccatgtccttccatgatgaaaccctcccatcagaaggtgcaaaagtg
gcacatttttgctccatgtgcgggcctaaattctgctctatgaagataacagaggatgtt
cgaaagtatgcagaggagcatggttatggtaatgcagaagaagctgtgcaacatgggatg
gatgccatgagtgctgagttcctggctgctaggaaaactataagtggagagcaacatggt
gaagttggtggagaaatttacctgccagcaaattacatcagttcctcggagagatga
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