Populus nigra (Lombardy poplar): 133705512
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Entry
133705512 CDS
T10372
Name
(RefSeq) serine/threonine-protein phosphatase PP1 isozyme 3-like isoform X1
KO
K06269
serine/threonine-protein phosphatase PP1 catalytic subunit [EC:
3.1.3.16
]
Organism
pnz Populus nigra (Lombardy poplar)
Pathway
pnz03015
mRNA surveillance pathway
Brite
Enzymes [BR:
pnz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
133705512
Protein phosphatases and associated proteins [BR:
pnz01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
Catalytic subunits
133705512
Transcription machinery [BR:
pnz03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
133705512
Messenger RNA biogenesis [BR:
pnz03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
133705512
Spliceosome [BR:
pnz03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
133705512
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
133705512
NCBI-ProteinID:
XP_061986750
LinkDB
All DBs
Position
10:complement(5040182..5045180)
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AA seq
328 aa
AA seq
DB search
MEPFVLDGIITRLLEVRGKPGKQVQLSEAEIRQLCITSREIFLKQPNLLELEAPIKICGD
VHGQYSDLLKLFEYGGLPPRANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGN
HECASVNRIYGFYDECKRRFNVRLWKVFTDCFNCLPVAALIDEKILCMHGGLSPDLRNLD
QIRNLYRPAVVPETGLLCDLLWSDPSKDIQGWGANDRGVSYIFGADRVTEFLQKHDLDLI
CRAHQVVEDGYEFFANRQLVTIFSAPNYCGEFDNAGAMMSVDENLLCSFQILRPAEKKPK
FGFGSTGTAKNGTFPPKIKVEKYEKSFQ
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atggagccttttgttcttgatggaatcattaccaggttacttgaagttaggggaaaacca
gggaagcaggtccagctttctgaggctgaaatcaggcaactttgcatcacttcaagggag
attttcttgaagcagcctaatcttttagagcttgaagctcctatcaagatttgtggagat
gtgcacggacaatattctgatctgctgaagctttttgaatatggtggattacctcctcgt
gccaattacttatttttgggggattatgtagatcgtggaaagcaaagcctggaaactata
tgccttctgcttgcatataaaataaaatatcctgaaaactttttcctattgagaggcaac
catgaatgtgcttctgtaaaccgtatatatggattttatgatgagtgcaaacgaagattc
aatgtcagactatggaaggttttcacagattgcttcaactgcctgcctgtggcagctctc
attgatgaaaagattctctgcatgcatggtggactttctcctgatctgcggaatttggat
cagataagaaatttataccgacctgcagttgttccagaaaccggtttgttatgtgatctc
ctctggtctgatcccagtaaagacattcaaggttggggtgcaaatgataggggagtttca
tatatatttggtgctgatagggtgacagaatttcttcagaagcatgaccttgatctaatc
tgccgagctcatcaggttgtagaagatggatatgagttttttgctaataggcaactcgta
accatattttcagcacctaattattgtggagagtttgacaatgctggtgccatgatgagc
gtggatgagaatctgctatgttctttccaaatactgagacctgcagaaaagaagccaaag
tttggctttgggagcactggcactgctaagaatggtacctttccacctaaaatcaaggtg
gaaaagtatgagaaatcctttcaatga
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