Populus nigra (Lombardy poplar): 133705517
Help
Entry
133705517 CDS
T10372
Name
(RefSeq) ABC transporter B family member 20
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
pnz Populus nigra (Lombardy poplar)
Pathway
pnz02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
133705517
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pnz02000
]
133705517
04147 Exosome [BR:
pnz04147
]
133705517
04090 CD molecules [BR:
pnz04090
]
133705517
Enzymes [BR:
pnz01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
133705517
Transporters [BR:
pnz02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
133705517
Exosome [BR:
pnz04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
133705517
CD molecules [BR:
pnz04090
]
Proteins
133705517
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_29
AAA_21
AAA_15
AAA_23
RsgA_GTPase
DUF87
AAA_16
Motif
Other DBs
NCBI-GeneID:
133705517
NCBI-ProteinID:
XP_061986757
LinkDB
All DBs
Position
10:complement(13613375..13622017)
Genome browser
AA seq
1399 aa
AA seq
DB search
MMISRGLFGWSPPHIQPLTPVSEVSEPPESPSPYLDTSAEAAAAAAAAAQAEAEEEIEEA
EEMEPPPAAVPFSGLFACADRLDWGLMIVGSLAAAAHGTALVVYLHYFGKIIGVLRIAPE
EERFDRFTDLAMHIVYLAVGVFAAGWIEVSCWILTGERQTAVIRSKYVQVLLNQDMSFFD
TYGNNGDIVSQVLSDVLLIQSALSEKVGNYIHNMATFFSGLAIGFVNCWQIALITLATGP
FIVAAGGISNIFLHRLAESIQDAYAEAASIAEQAVSYSRTLYAFTNETLAKYSYATSLQA
TLRYGILISLVQGLGLGFTYGLAICSCALQLWVGRFLVTSHKAHGGEIVTALFAIILSGL
GLNQAATNFYSFDQGRIAAYRLFEMISRSSSTVNQDGNNLVAVQGNIEFRNVYFSYLSRP
EIPILSGFYLTVPAKKTVALVGRNGSGKSSIIPLMERFYDPNLGEVLLDGENIKNLKLEW
LRSQIGLVTQEPALLSLSIRDNIVYGRDATLDQIEEAAKIAHAHTFISSLEKGYETQVGR
AGLALTEEQKIKLSIARAVLLNPTILLLDEVTGGLDFEAERAVQEALDLLMLGRSTIIIA
RRLSLIRNADYIAVMEEGQLVEMGTHDELITLNGLYAELLKCEEAAKLPRRMPVRNYKET
AAFQVEKDPSTGHSYQEPSSPKIARSPSLQRAPGIFRPPDSMFNSQESPKVLSPPPEKMM
ENGLPLDGADKEPSIRRQDSFEMRLPELPKIDVQSAHRQTSNGSDPESPVSPLLTSDPKN
ERSHSQTFSRPHSHSDDVPIKVKESKDTKHLEEPSFWRLAELSLAEWLYAVLGSIGAAIF
GSFNPLLAYVISLIVTAYYGRDLQQDINRWCLIIAIMGMVTVVANFLQHFYFGIMGEKMT
ERVRRMMFSAMLRNEVGWFDEEDNGADTLSMRLANDATFVRAAFSNRLSIFIQDSAAVIV
AVVIGVLLQWRLALVALATLPVLTVSAIAQKLWLAGFSRGIQEMHRKASLVLEDSVRNIY
TVVAFCAGNKVMELYRLQLQKIFKQSFFLGMAIGFGFGFSQFLLFACNALLLWYTAYSVK
NHNVNLHTALKEYMVFSFATFALVEPFGLAPYILKRRKSLISVFEIIDREPKIDPDDNSA
LKPPNVYGSIELKNVDFCYPTRPEMLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIER
FYDPVAGQVLLDGRDLKLYNLRWLRNHLGLVQQEPIIFSTTIRENIIYARHNASEAEIKE
AARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQRIAIARVVLKNAPILLLDEASSSIE
SESSRVVQEALDTLIMGNKTTILIAHRTAMMRHVDNIVVLNGGRIVEEGAHDSLMAKNGL
YVRLMQPHFGKGLRQHRLI
NT seq
4200 nt
NT seq
+upstream
nt +downstream
nt
atgatgatctccaggggattattcggatggtccccgccgcatatacaaccgttgacgccg
gtctccgaggtttccgagccgccggagagtccgtctccgtacttagataccagtgcggag
gcggccgcggctgctgctgcggcggctcaagcggaagcagaggaggagatcgaggaggct
gaggagatggagccgccgccagctgctgttcctttctccgggttgtttgcttgtgctgat
aggttagattgggggctcatgatcgttgggtcgcttgcagcggctgcgcacgggactgct
cttgttgtttacttgcattactttgggaagattattggggttttgaggattgcgccggag
gaggagcgatttgacaggtttactgatcttgctatgcacattgtttatttagccgtggga
gtttttgctgctggttggattgaggtttcctgctggattttaactggggaacgtcagacc
gcggtcatcaggtcaaagtatgttcaggtattgctcaatcaggacatgagctttttcgat
acatatgggaataacggggatattgttagccaagtattgagtgacgtgctcctcattcaa
tctgcattgagtgaaaaggttggaaattatattcataatatggctacatttttcagtggt
cttgctattggatttgtcaactgctggcaaattgcactaataacattagccactggccca
ttcattgttgctgctggaggtatctcaaatatatttcttcataggcttgctgagagcatt
caagatgcatatgctgaagctgctagcattgctgaacaggcagtctcttatagtaggacc
ttgtatgcattcacaaatgaaactctggcaaagtattcatatgcaacatcactacaagca
actttgagatatggtattttgattagccttgttcaaggacttgggcttggttttacatat
gggcttgcaatatgttcttgtgccttgcaactttgggttggaaggtttctggttacaagt
cataaagctcatggtggtgaaatagtaacagccctgtttgctataattttaagtggcctt
gggctgaatcaagctgcaaccaatttctattcatttgaccaaggacgaattgctgcatat
agactctttgagatgataagtcggtcatcctccacagttaatcaggatgggaacaaccta
gtggcagtgcaaggaaatatcgagtttcgaaatgtttattttagctatctgtctcgtcct
gagattcccatcttgagtggattttacctcactgtaccagctaaaaagacagtggctctt
gttggaagaaatggttctggaaagagcagcattatcccactcatggagcgcttttatgat
cctaacttaggagaagttcttcttgatggagagaatattaaaaacctgaaactggaatgg
ctcagaagccaaatagggctggtcacccaggaacctgccttgctgagtttgagtataaga
gataatattgtatatggacgagatgctactttggatcagattgaggaagctgccaaaata
gcacatgcacacacatttatcagttcacttgaaaaaggctacgagacacaggtcggtagg
gctggtttagcattgactgaggagcagaaaattaaactttctattgccagggcagtgctt
ttaaatccaacaattcttctgcttgatgaggttactggtggacttgattttgaagctgag
agagcagttcaagaggcactagatcttctcatgttgggacgttcaaccattataatagct
agacgtcttagtctaattaggaatgctgattatatagctgtaatggaggagggtcagctt
gttgaaatgggtacacatgatgaattaataaccttaaatggtctatatgcagagcttctc
aaatgcgaagaagcagcaaaacttccaaggaggatgccagttagaaactacaaggagact
gctgctttccaggttgaaaaggatccttccacaggccacagctatcaagaaccatcctcc
cctaaaatagccaggtcaccatcacttcagagagctcctggtatatttcggcctccggat
agcatgtttaattcacaagaatcaccaaaagttctcagcccaccaccagagaagatgatg
gaaaacggtcttcccttggatggagctgataaggaaccatcaataagaaggcaggatagt
tttgaaatgagactacctgaattacccaagattgatgtccagtctgcacatagacagaca
tcaaatggttcagaccctgaatcccctgtttccccacttttgacatccgatcctaaaaat
gagcgttcccactcacagactttcagtcgaccccacagtcactcagatgatgttccaatt
aaagtgaaggaatcaaaggatacaaagcatctggaagaaccatcattttggagactagca
gagcttagtttggcagagtggctttatgctgttttaggaagcattggtgctgctattttt
ggttctttcaatccactacttgcttatgttatttcactgatagtgactgcttattatgga
cgagacttgcagcaggatataaacaggtggtgcttgataattgccatcatgggtatggtg
actgttgttgccaatttcttgcagcacttctattttggtatcatgggagagaaaatgact
gaacgtgtccgcagaatgatgttttcagcaatgctgcggaatgaagtcggatggttcgat
gaagaggataatggtgctgacacattatccatgcgcttggcaaatgatgctacttttgta
agagctgcattcagcaaccgactttcaatatttatacaggacagtgctgcagttattgtg
gctgttgtcattggggtgctgcttcagtggcgattggctcttgtagcactggcaaccttg
ccagttctcactgtctctgcaattgcacagaagttgtggcttgctggattttccaggggc
atccaggagatgcacagaaaggcatcattggtccttgaggattctgttagaaacatttat
acagttgtggcattctgtgcgggtaataaagtaatggagctctacagattgcaactgcag
aaaatatttaagcagagttttttccttggaatggccattggttttggatttggtttttct
cagtttcttcttttcgcctgtaatgcccttcttctctggtacactgcatactctgtaaag
aatcacaatgtgaatcttcatacggctctcaaggagtatatggttttttcttttgcaaca
tttgcactggtggagccttttggattggctccctacattcttaagcggcgaaaatctctt
atttcagtatttgaaattatagatcgagaacctaagattgacccagatgataactcagca
ctgaagcctccaaatgtttatggaagcattgagttgaagaatgtggatttctgttatcca
actcgtccagaaatgttggtattgagcaatttcagtctcaaggtgaatggaggacaaact
gtagctgtggtgggagtttcagggtctggaaaaagcactataatttctttaattgaaaga
ttttatgatccagttgccggtcaggtcctactggatggccgggatttaaaactttataat
ttgagatggttgaggaaccatcttggtcttgttcagcaggaaccgattatcttctcaaca
actataagagaaaatattatatatgctaggcacaatgcaagcgaggctgagataaaagag
gctgcaagaattgctaatgctcaccatttcatcagtagtctgcctcatggttatgacaca
catgtgggaatgaggggcgtggaccttaccccagggcagaagcagagaattgcaattgct
cgagtggtgttgaagaatgcacccatcttgttattggatgaagccagctcatccatcgaa
tctgaatcaagtcgagtggtacaagaggcactagatactcttattatgggaaacaaaact
accattttgatagctcatagaactgcaatgatgaggcatgttgacaacattgtggttctt
aatggaggacgaattgtcgaggaaggggcccatgattctttgatggcaaagaatggtttg
tatgtccgtctgatgcaaccccactttggaaagggtttgcgacaacatcggttgatttaa
DBGET
integrated database retrieval system
