Populus nigra (Lombardy poplar): 133705530
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Entry
133705530 CDS
T10372
Name
(RefSeq) nuclear pore complex protein NUP54-like
KO
K14308
nuclear pore complex protein Nup54
Organism
pnz Populus nigra (Lombardy poplar)
Pathway
pnz03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
133705530
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pnz03019
]
133705530
Messenger RNA biogenesis [BR:
pnz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
133705530
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup54
Motif
Other DBs
NCBI-GeneID:
133705530
NCBI-ProteinID:
XP_061986772
LinkDB
All DBs
Position
10:complement(4378342..4383013)
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AA seq
369 aa
AA seq
DB search
MFGTPSSTPAFGTPSSTPPFGTPSSTPLFGTPSTPAFANGGFGSSLFSTPFTSQTQQQQQ
QQTSLFQQPSTTGFGFQQQQQQTPFATPLQTTPFPSPPPPPPQLSTQMALVAPLPFSLAD
RDIQAIVDAYKEDPGNLKYAFKYLLLSVTDPQHRRKLAGVSDIMWAESMAKLEGMEGTVR
ERLWPQLVQGFKDLSHRLKLQDEVIVSDAERLRMTQSNIKMLQRHFQAVALPRIERMRQK
EQSLQRHLLRVMRIMETLEGKGFRLPLTKAEAELAEKLAAIIRQLKGSGTELSRRVQNLL
TVFRVQENGIGAGGSLYLPGSTKIHEQSLADMQEVLQQQTEAIARLGNVLKRDIRDMEIM
MAEGTEMTE
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atgttcggtactccatcttccacccccgccttcggcacgccgtcttccaccccgccattc
ggcaccccctcttctactcccttattcggcactccttcaacgccagctttcgctaatgga
ggattcggttcttctttattctctactccatttacttctcaaactcagcagcagcagcag
caacaaacctcgctttttcagcaaccgtctactactggtttcggatttcaacagcaacag
cagcagactccgttcgctacgccgcttcaaacgacaccgttcccttctcctcctcctcct
cctcctcaattgagtactcagatggctctcgttgctcctcttcctttctctctcgccgat
cgcgacattcaggcgattgtggatgcttataaagaggaccctgggaaccttaagtatgct
ttcaagtatttgttgttaagtgtaactgacccgcagcatagacgaaagcttgctggtgta
tcagacatcatgtgggcggagtctatggcgaagctagagggtatggaaggtacagttaga
gaacgcctctggcctcagcttgttcaaggtttcaaagatctttcacaccgcctcaagctc
caagatgaagtaatcgtttcagatgcagagagattgcgaatgacccaaagcaacataaaa
atgcttcaaaggcattttcaagctgtggctcttccaaggattgaaagaatgagacagaaa
gagcaaagtcttcagaggcatcttttaagggtgatgagaataatggagacattggagggt
aagggtttccgattgcccttaacaaaagcggaagctgagttggctgagaagttagctgca
ataattagacagctaaaaggatctggcacagaactttctaggagggttcaaaacctactc
actgtatttcgtgttcaagaaaatggaattggtgctggaggttctctttatcttccagga
tcaaccaaaatacatgaacaaagtcttgctgatatgcaggaggttttacaacagcagact
gaagctattgcaaggcttggcaatgtgttgaagcgagacatcagggacatggaaattatg
atggccgagggcacagaaatgacagaataa
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