Populus nigra (Lombardy poplar): 133705557
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Entry
133705557 CDS
T10372
Name
(RefSeq) protein indeterminate-domain 5, chloroplastic-like isoform X1
KO
K25870
zinc finger protein IDD3/4/5/6/7/8/9/10/11/12/13
Organism
pnz Populus nigra (Lombardy poplar)
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pnz03000
]
133705557
Transcription factors [BR:
pnz03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
133705557
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Gene cluster
GFIT
Motif
Pfam:
C2CH-4th_BIRD-IDD
C2H2-2nd_BIRD-IDD
C2CH-3rd_BIRD-IDD
zf-C2H2
zf-C2H2_jaz
zf-met
zf-C2H2_6
zf-C2H2_STOP2_C
zf-C2H2_4
Motif
Other DBs
NCBI-GeneID:
133705557
NCBI-ProteinID:
XP_061986811
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Position
10:complement(6960796..6966894)
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AA seq
609 aa
AA seq
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MAASSSVPFFGIREEDQNQMKQQHSSTPTSSSAQAPPPPKKKRNQPGTPTDPDAEVIALS
PKTLMATNRFICEVCNKGFQREQNLQLHRRGHNLPWKLKQKTTKEVRRKVYLCPEPTCVH
HDPSRALGDLTGIKKHYSRKHGEKKWKCEKCSKRYAVQSDWKAHSKTCGTREYRCDCGTL
FSRRDSFITHRAFCDALAQESARNPPPNLNTIGSHLYGSSNMTLGLSQVGTQISSLQDHS
NQSTDVLRFGGGVRTGQFDHLLSPSIGSSSFRQQMPSSAFFMQETSQNIYHDENQSQQEL
LQNKPFHYGLMQFADIHNTTSNPPSAGNLFNLSFLSNSSTTDSNNANNSNSNLPTSGLLI
SDHFNNQNGVGGGSEGTNNFLNNVRGNQMTSGVPSLFSSAVQNDNMVSHMSATALLQKAA
QMGTTSSNNSASLLRSFGSSSSSGTKSDRALVGGNFGGMLSDNENNLHELMNSFAPGNPS
IFGSGHAQENPYGGYTANRTSLEQEKQHHGPNFGNINMDEAKLHQGLNASNIGGSDRLTR
DFLGVGPQIVRSMSGSSGFSQREKQQQQQLQHQHHGMDMGDSSLDLERHNTNISAAPTSQ
SFGGNGSFQ
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atggctgcttcttcatccgtgcctttctttggaattagggaagaggatcaaaaccagatg
aaacaacagcattcctcaaccccaacttcatcttcagcccaggctccgccgccaccaaag
aaaaagagaaaccaacctggaacaccaacagatccagacgcagaggtgatagcactatct
cccaagaccctaatggcaacaaacaggttcatatgtgaggtatgcaacaaagggttccaa
agggagcaaaacctacagctccacagaagaggacacaacctaccttggaagctaaagcag
aagactacaaaagaagtgaggaggaaggtttatctgtgtcccgagcccacatgcgtccac
catgacccttctagagctcttggtgaccttactggaataaaaaaacactactccaggaaa
cacggtgagaagaaatggaagtgtgagaagtgctcaaaaagatacgctgttcaatctgat
tggaaagcccattctaagacttgtggcactagagaatacagatgtgactgtgggactctc
ttctcaagacgtgacagctttatcactcacagggcattctgtgacgcattggctcaagaa
agtgcaagaaaccctcctcccaacttgaacacaattgggagtcatttgtatggaagtagc
aacatgaccttaggcttatctcaagtaggtactcaaatttcttcattacaagaccacagt
aaccagtctactgacgtcttacgatttggtggtggtgtccggactggacaatttgatcat
cttctctctccatcaattggatcatcttcatttcgacagcaaatgccttcatctgccttc
ttcatgcaagaaacaagccagaatatttatcatgatgaaaaccaatctcagcaagagttg
ttgcagaataagccatttcattatggactgatgcaatttgctgatattcacaacaccaca
agcaaccctccctctgctggcaatctattcaaccttagctttctttccaatagtagcacc
acagacagtaacaacgcaaacaattccaacagcaacttaccaacttcaggattgctaata
tccgatcatttcaataaccaaaatggtgttggtggtgggagtgaagggactaataacttc
ttaaacaatgtaaggggtaatcaaatgacctctggtgttccttctctctttagctctgcg
gttcagaatgataacatggtctctcacatgtctgctactgcgctgcttcaaaaggctgct
caaatgggtaccacttcaagcaacaatagtgcctcattgctaagaagttttggtagctct
tcttcaagtggaaccaaatcagatagagcgctagttggtgggaactttggtggcatgctc
agcgacaacgagaataatcttcatgaactaatgaactcatttgctcctgggaatccctcc
atttttggttctggacatgcacaagaaaacccctacggtggatatactgcaaataggact
agtctggagcaagaaaagcaacaccatggcccaaattttggcaatattaatatggatgaa
gcaaagttgcaccaaggtctcaatgcaagcaatatcggtggatctgatagactgacaaga
gactttcttggtgttggtcctcaaatagtgagaagcatgagtggatcatcagggttttca
caaagagaaaaacagcagcagcagcagctacaacatcagcatcatggcatggatatgggt
gactcctccttggatttagagaggcacaatactaatatttctgcggcgccgacaagccaa
tctttcggaggaaatgggagttttcagtga
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