Populus nigra (Lombardy poplar): 133705716
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Entry
133705716 CDS
T10372
Name
(RefSeq) elongator complex protein 1-like isoform X1
KO
K11373
elongator complex protein 1
Organism
pnz Populus nigra (Lombardy poplar)
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pnz03016
]
133705716
Transfer RNA biogenesis [BR:
pnz03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
133705716
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_ELP1_1st
Beta-prop_ELP1_2nd
A-sol_ELP1
TPR_ELP1
HB_ELP1
TPR_GEMI5
Motif
Other DBs
NCBI-GeneID:
133705716
NCBI-ProteinID:
XP_061987057
LinkDB
All DBs
Position
10:13503616..13509218
Genome browser
AA seq
1323 aa
AA seq
DB search
MKNLKLHSVISQNLELQSQQEVLLFSAFDFERNRLFFASSNNFIYTADLSSIQNGKSKSL
LLASSVVNQIELEDGDLITAFDYLLEKEALIIGTENGLLLLHNVDHNSTEIVGQVNGGVK
CISPSPDGDLLAILTGFRQMLVMTHDWDLLHETAVGDGDGAGLDVSEFDGKDMFESSVSW
RGDGKYFATLSEASDSSLMLKRIKVWERDSGALHSTSDSKIFMGAVLEWMPSGAKIAAVY
DRKVENRCPDIVFYEKKGLGRSSFSIKEAVDAKVESLKWNCSSDLLASVVRCEKYDAVKV
WFFSNNHWYLKHEVRYSRQDGVRFMWDPVKPLQFICWTLGGQITSYNFAWNSAVVENSIA
LAIDGSKILVTPLSLSLMPPPLHLFSLKFPSAVRDLALYSNNSKNSVAAFLSDGSLGVVE
LPDPDTWEELEEKEFGVEASISETGFGSFVHLTWLDSHILLAVSHYGFTQSNCASHSSMG
EDGLSGFYLQEIELVCSEDHVPSLVTGSGWHARISHRNYLEGLVIGIAPNPAKKCSAFVQ
FDGGKIVEYASILGLAGTGGSTKHDDMSFSSSCPWMSAAQVSDSGSLKPLLFGLDDIGRL
HFGGKVLCNNCSSFSLYSNLADQVITHLILSTKQDFLFAVEISDILHGELELKYENFVHT
GNRRKEENMNFINIWERGAKIIGVLHGDAAAVVIQTTRGNLECIYPRKLVLASIVNALIQ
RRFRDALLLVRQHRIDFNVIVDHCGWQTFFQSASEFVKQVNNLSYITEFICSIRNENIME
TLYKNYISTPYQNGGGDVQAKDIMGFDASSKVSALLLAIRKALEEQVSESPARELCILTT
LARSDPPALEEALERIKVIRQMELLGSSDPRRMSYPSAEEAIKHLLWLSDSDAVFEAALG
LYDVNLAAIVALNSQRDPKEFLPYLQELERMPSLIMSYNIDLRLHRFEKALRHIVSAGDA
YYSDCMDLMNKNPQLFPLGLQLITDPAKKMQALEAWGDHLSDEKCFEDAATTYLCCSSLK
NALKAYRACGNWSGVLSVAGLLKMEKNEIMQLAHDLCEELQALGKPREAAKIALEYLGDV
NSGINLLISGRDWAEALRVAFMHSQENLVLTVKNGALDCASTLISEYKEGLEKVGKYLAR
YLAVRQRRLLLAAKLQSEERSMNDLDDDTVSEASSNFSGMSAYTTGTRKGSASSVTSSVT
SKARDMRRQRKRGKIRPGSADEELALVEHLKGMSLTAGAKHELRSLLVTLVMLGGEEIAR
KLQFAVENFQLSQMAAVKLTEDTISTDIISEQAHNLERYVQKLRNELPNLDSFSWRYKVF
ISP
NT seq
3972 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaacctgaagctacactcggtgatctctcagaatctggaattacaatcgcagcaa
gaagttctcctcttctccgctttcgacttcgaacgcaaccgtctcttcttcgcttcctcc
aacaatttcatttacacagctgatctttcttctatccaaaatggaaaatcgaaaagcttg
ctgttagcgtcgtcggtggttaatcaaattgaattggaagatggagacttaattacggca
tttgattatctattggagaaagaagccttaattattggaacggaaaatggtcttttatta
ttgcataatgttgatcataattctactgaaatcgttggtcaagtcaatggcggtgttaag
tgtatctcgccgagtcctgacggcgatttgcttgctatcctcactggtttccgacaaatg
ctagttatgactcatgattgggatttgttgcatgaaaccgcagttggtgatggtgatggt
gctggtcttgacgtaagtgaatttgatggcaaggatatgtttgagagttctgtttcatgg
cgaggtgatgggaaatattttgcgactttaagtgaagcgagtgattcttctctcatgctt
aagaggattaaggtttgggaacgtgattcaggtgcgttgcattctacatcggattcaaag
atatttatgggggcagttttggaatggatgccgagtggagcgaaaattgctgctgtgtat
gataggaaagtggagaataggtgtcctgatatagttttctatgagaagaaaggattgggg
aggagttcttttagtattaaagaagcagtggatgcaaaggtggaaagtcttaagtggaat
tgtagttcggaccttcttgcatctgtagttagatgtgagaaatacgatgctgttaaggtc
tggtttttcagcaacaatcattggtatttgaaacatgaagttagatactcgagacaggat
ggagtgaggttcatgtgggatccagtaaagcctctgcagtttatttgctggacccttgga
ggccagatcacaagttacaactttgcctggaattctgctgtggtggagaactcaatagca
ttagccattgatggctccaaaatacttgtaactccactttctttatcactgatgccacct
ccccttcatttattcagcctcaaatttccaagtgcagtaagagacctggctttatattcc
aataattctaagaatagtgtagctgcatttttatcagatggctctttgggtgttgtagaa
cttcctgacccggatacatgggaggaacttgaagaaaaggaatttggtgttgaagcttct
atttctgagacaggttttggatcctttgtacacctcacatggctggattctcacatatta
cttgctgtttcgcattatggcttcactcaaagtaattgtgcatcccacagctcaatgggc
gaggatggacttagtggtttctatttgcaggaaattgaacttgtgtgttccgaggatcat
gtaccaagtttggtaactggatcaggctggcatgcaaggatttcccataggaactatttg
gaagggcttgtgattggcattgctcctaatcctgctaagaaatgttcggcttttgttcag
tttgatggaggaaaaattgttgagtatgcatcaatattgggcttggctggaactggaggt
tcaacaaaacatgatgacatgagcttttcatcatcttgcccttggatgagtgcggctcag
gtcagtgacagtgggtcgttaaagcccttgctttttggtcttgatgacattgggaggctg
cattttggtgggaaagtactatgcaacaactgcagtagtttctcattatactctaatttg
gctgatcaagtaatcacacatttgatactttccaccaaacaagactttctctttgctgtg
gaaatcagtgatatactgcatggagaattagagttaaaatatgagaactttgttcacaca
ggtaacagaagaaaagaagaaaacatgaacttcataaatatttgggaaagaggtgccaaa
attattggtgtcctgcatggtgatgctgctgctgtcgttatacagacaactaggggaaat
ctggaatgcatttaccctagaaagcttgtccttgcttcaattgtcaatgctttgatccaa
aggcgttttagggatgcactgctgttggtcaggcaacatagaatagatttcaatgttatt
gttgaccattgtggatggcaaactttttttcagtcagcttcagaatttgtcaaacaggtt
aacaatttgagctatataactgagttcatttgttccataagaaacgagaacattatggag
actctatacaaaaactatatctctacaccctaccaaaacggaggtggagatgttcaagct
aaggacatcatgggttttgatgcttccagtaaggtttctgctctgctcctggccataagg
aaggctcttgaggaacaagtctccgaaagccctgcaagggagctttgtattctgaccact
ctggcacgtagtgatcctcctgcgcttgaagaagctttggaaaggatcaaagttattcgt
caaatggaattattaggttcaagtgaccctaggagaatgtcctatccttctgctgaagaa
gctataaagcatctgttgtggttatctgattctgatgctgtattcgaagctgccttggga
ctttatgatgtgaaccttgcagctattgtggcactgaactctcaacgagaccccaaggaa
tttcttccttatctacaagaattagaacgcatgccaagcctcataatgagctacaatatc
gaccttcggttacaccggtttgagaaggctctccgacatattgtttctgctggtgacgct
tattattcagattgtatggacctcatgaacaaaaatcctcaattatttcctctgggtctt
caattgattactgatcctgcaaaaaaaatgcaagcccttgaggcctggggtgatcatctt
agtgatgagaaatgctttgaggatgccgcaacaacttatctgtgttgttccagtttgaaa
aatgccttgaaggcatatcgtgcttgtggtaattggagtggggtgctttctgttgctggg
ctccttaaaatggaaaaaaatgagataatgcaacttgctcatgatctttgtgaagagctc
caagcacttggtaaaccaagagaggctgccaaaattgctctggagtatttgggagatgtt
aacagtgggattaatttgttaattagtggaagggactgggcggaggctttgagggttgct
tttatgcatagtcaagagaatctggtattgacagtgaagaatggagctttggattgtgca
agcacgctaatcagtgaatacaaggaaggtttggagaaggtagggaagtacttggctcgt
tatttagctgttcgacagagaagattacttctggcagcaaagcttcagtcagaggaaagg
tcaatgaatgatctggatgacgatactgtttcagaagctagcagtaatttcagtggcatg
agtgcctacaccacaggaacaaggaagggctctgcctcttctgtgacctccagtgtcact
agtaaggctagagacatgaggcgtcaacggaaaagaggaaagattcgccctggcagtgct
gatgaggagttagcactggtagagcatttgaaaggcatgtctctaacagctggagcaaag
catgagcttagatctttattagttacacttgtgatgcttggtggtgaagagattgcaaga
aagctccaatttgctgtagagaattttcaactgtctcagatggcagcagtcaaactaact
gaagatacgatttctaccgatatcataagtgagcaggcacacaatttggagcgatatgtt
caaaaattgagaaacgaactgccaaatttagattcgttttcttggcgatataaagtattc
atttctccttga
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