Populus nigra (Lombardy poplar): 133705840
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Entry
133705840 CDS
T10372
Name
(RefSeq) U-box domain-containing protein 14-like
KO
K27628
U-box domain-containing protein 12/13/14 [EC:
2.3.2.27
]
Organism
pnz Populus nigra (Lombardy poplar)
Pathway
pnz04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
133705840
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pnz04121
]
133705840
Enzymes [BR:
pnz01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
133705840
Ubiquitin system [BR:
pnz04121
]
Ubiquitin ligases (E3)
U-box type E3
133705840
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm
U-box
ARM_ARMC5
HEAT_2
zf-RING_UBOX
HEAT_EZ
KAP
zf-Nse
MLKL_N
zf-C3HC4_4
Arm_2
zf-C3HC4_2
zf-C3HC4
zf-RING_2
IncFII_repA
zf-rbx1
Motif
Other DBs
NCBI-GeneID:
133705840
NCBI-ProteinID:
XP_061987211
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All DBs
Position
10:14655157..14659262
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AA seq
628 aa
AA seq
DB search
MSLTGDPSSELLSRLVDSVKEISGLPECRNVFKKTHGDLVRRIKLLSPMFEELKDNNEEL
SEEATKGFELLRTVLDSAKELLKSVVEGSKVYQTLQRDDIADKINQITEKIEAALGEIPY
DKLNLSEEVQEQIELVHAQFRRAKGRQELQDHQLEVDLAIAQREKDPDRAILKRLSEKLH
LQTIDDLKKESLAFHELVIASGGDPGDWFKKMASLFKKLKDYVQTENPEIDSAEAGKGMI
KHRSPVIPDDFRCPISLELMKDPVIVSTGQTYERSCIQKWLDAGHKTCPKTQQTLLHTAL
TPNYVLKSLIALWCESNGVELPKQPGACRSKKVGSSMSDCDRAAVTTLLDKLGNGSLEQQ
RSAAGELRLLAKRNADNRVCIAEAGAVPLLVELLSSTDPRTQEHAVTALLNLSINDLNKG
TIVNAGAIPDIVDVLKNGSMEARENAAATLFSLSVIDENKVAIGAAGAIPALIKLLCDGT
PRGKKDAATAIFNLSIYQGNKARAVKAGIVPPLMRLLRDAGGGMVDEALAILAILAGHQE
GKVAIGQVDPIPVLIEVIRTGSQRNRENAVAILWSLCTGDSQQLILAKQFGAEEALKELS
ESGTDRAKRKAGSILELLQRADTVADQS
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
atgtcattaacgggagatccgagttctgagttgctgagtcgactcgttgactcagtgaaa
gagatttctgggttaccggagtgtagaaatgtttttaaaaagacgcatggcgatttggta
cgtaggattaagctattgagccctatgtttgaggaattgaaggataataatgaagagcta
agtgaagaagcaactaaaggatttgaattattgagaaccgttttagattctgctaaggaa
cttctcaaatcggttgttgaaggaagcaaggtgtatcagaccttgcaaagggacgacata
gcagataagatcaaccagattacagaaaaaattgaagcagcattgggtgagattccttat
gacaaactcaatttatcagaggaagttcaagaacagattgaacttgtgcacgctcaattc
agaagagcaaagggaagacaagaactccaagatcatcaactggaagttgatttggccata
gcacagagagaaaaggatcctgaccgtgcaatactaaaaagactttcagaaaagttgcat
ctccagactatcgatgatctaaagaaagaatcccttgctttccatgaactggttattgca
agtggtggagatccaggagactggttcaagaagatggcatccctctttaagaagttaaag
gactatgttcaaacagaaaaccctgaaattgattccgctgaggctggaaagggtatgatt
aaacacagatctcctgttatcccagatgattttcggtgcccaatatctcttgaactgatg
aaagatcctgttattgtctctaccggacagacatatgaaagatcctgcatccaaaaatgg
ctagatgcaggccataagacatgtccaaaaacgcagcagacccttttgcatactgcgctt
acaccgaactatgttttgaagagtttgattgctttatggtgtgagagcaatggagtagag
ctccctaaacagccaggggcttgtagaagcaaaaaagtaggaagcagcatgtcagattgc
gaccgagctgcagtcactaccttattagacaaattgggcaatggtagtctggaacaacaa
agatcagctgctggagagcttcgtttattagcaaagaggaatgcggataacagagtctgc
attgctgaagcaggagcagttccactccttgtggagctattatcctcaacagatcctcga
acccaagagcatgctgttacagcacttctcaacctttccataaatgaccttaacaaggga
accattgttaatgcgggagccattcctgatatagttgatgttttaaaaaatggaagcatg
gaggccagggaaaatgcagccgcaactcttttcagtttgtccgtgatagatgagaataag
gtggcaataggagcagctggggcaatcccagctcttataaagttgctttgtgatgggact
ccaagaggaaagaaggatgctgctactgctatctttaatctttcaatttatcagggaaac
aaggctagggctgtaaaggctggtattgtgccacccctaatgaggttgctgagggatgct
gggggaggaatggtggatgaagcactggcgattcttgccatccttgcaggtcatcaagaa
gggaaggtagcaattggtcaggttgacccgattcctgttctgatagaggtcatcaggact
ggatctcaacgcaaccgagagaatgctgtagcaatcttgtggtcgctttgcactggtgat
tcacagcagttgatcttagctaagcagtttggtgctgaagaggcactaaaggagctctcg
gagagcggtactgacagggccaagagaaaggctggaagcatattagagctccttcaacga
gctgatactgtggctgatcaaagctga
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