Populus nigra (Lombardy poplar): 133705990
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Entry
133705990 CDS
T10372
Name
(RefSeq) paired amphipathic helix protein Sin3-like 4 isoform X1
KO
K11644
paired amphipathic helix protein Sin3a
Organism
pnz Populus nigra (Lombardy poplar)
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pnz03036
]
133705990
Chromosome and associated proteins [BR:
pnz03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
133705990
REST complex
133705990
Heterochromatin formation proteins
Other heterochromatin formation proteins
133705990
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAH
Sin3a_C
Sin3_corepress
PAH_ZNF598
HHD_RTEL1
Motif
Other DBs
NCBI-GeneID:
133705990
NCBI-ProteinID:
XP_061987460
LinkDB
All DBs
Position
10:complement(3022753..3033025)
Genome browser
AA seq
1450 aa
AA seq
DB search
MKRSRDDVYMGSQLKRPVLSSSTKGEASGQPQMIGGGGGGGGGGGGGGGGGGGGGQKLTT
NDALAYLKAVKDIFQDKREKYDDFLEVMKDFKAQRIDTAGVIARVKELFKGHRDLILGFN
TFLPKGYEITLPLEEEQPPQKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKE
NKSISEVYQEVAALFRDHHDLLLEFTHFLPDSSAAASALFPSARNSAPRDRSSAMPTMRQ
MHVDKKERAMASHAERDISVDRPDPDHDRAMIRADKDQRRRVEKEKERREDRDRRECERD
DRDYDHDGNRDFNQRFPHKRKPARRVEDSAAEQGGDGDESFGGMNPVSSTYDDKNAVKSA
LSQELAFCDKVKETLHNPENYQEFLRCLHLYTREIITRSELQSLVGDLLGKYPDLMDGFN
EFLALCEKKEGLLAGVVSKKSLWNEGNLPRVLKVEDRDRDRDRERDDGVKDRDREIRERD
RLDKSVAFGNKDTGGHKMSLFPSKDKLPAKPINELDLSNCERCTPSYRLLPKSYMIPPAS
QRTELGAEVLNDHWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVTTK
RVEELLEKINNNTIKMDSPIRIDEHLTALNLRCVERLYGDHGLDVMDVLRKNTSLALPVI
LTRLKQKQEEWARCRADFNKVWAEIYAKNYHKSLDHRSFYFKQQDTKSLSTKALLAEIKE
ISENKRKEDDVLLAFAAGNRRPIIPNLEFEYLDPDTHEDLYQLIKYSCAEVCTTEQLDKV
MKIWTTFLEPMLGVPSRPQGAEDTEDVVKAKNQSSKSGESEDSPSGGGAVTNSKHSNPSR
NGDESIQPEQSSSSRAWMLNGENRVKENGSPDADHVARKSDTSTSTLQHDKVLINAAAAD
ELSGVTKQAPSNDRLQNSNASLVTGAELSNGRTLVESGLSATPSRPSNGTVEGGLGIGSS
NEILPSTEGGEFSRPPVSTNGVATEVIKSNRYNDESAAQFKIEREEGELSPNGDFEEDNF
AVYGEAGLEAAHKVKDSAVSRQYQARQGEECGEAGAENDADADDEGGESAQRSSEDSENA
SENGDVSGSESGDGEDCSREEHEEDGDHDEHDNKAESEGEAEGMADAHDVEGEGTILPFS
ERFLLNVKPLAKHVPPSLHDKEKGSRVFYGNDSFYVLFRLHQTLYERIQSAKVNSSSAER
KWRASNDTSPTDLYARFMSALYNLLDGSSDNTKFEDDCRAIIGTQSYVLFTLDKLIYKLV
KQLQTVATDEMDNKLLQLYAYEKSRKHGRFVDIVCHENARVLLHDENIYRIECSSAPTRL
SIQLMDFGHDKPEVTAVSMDPNFASYLHNDFLSVVPDKKEKPGIFLKRNKHRYSDADECQ
AMEGFRVLNGLECKIACNSSKVSYVLDTEDFLFRPQKKSKTLQQNGSCHDDQAKISKRVQ
RFHRLLSSSS
NT seq
4353 nt
NT seq
+upstream
nt +downstream
nt
atgaagaggtcaagagatgatgtttacatggggtctcaacttaaaaggcctgtgctctct
tcttccactaaaggggaagcttctgggcaacctcagatgattggagggggaggtggtggt
ggtggtggaggaggaggaggaggaggaggaggaggaggaggaggacagaaacttacaaca
aatgatgccttggcatatctcaaggctgtcaaggatatatttcaagacaagagagaaaag
tacgatgactttcttgaggtcatgaaggatttcaaagctcaaagaattgacactgcgggt
gtcatagcaagggtgaaggagttatttaaagggcaccgtgatttaattttgggtttcaat
accttcttgccaaaaggatatgagatcaccctcccactggaagaagaacaacctccgcag
aaaaagccagttgaatttgaagaagcaattaattttgtgaacaaaattaagacaaggttt
caaggtgatgatcatgtttacaaatcttttttagacattttgaacatgtacagaaaggaa
aataagtccatcagtgaggtctaccaggaggtggctgcactttttcgagaccaccatgat
ctgctcttggagttcactcatttccttcctgattcttcagctgccgccagtgctcttttt
ccatctgccaggaattctgctccccgtgacagaagttctgccatgcctacaatgcgccaa
atgcatgttgacaagaaagaaagggctatggcctcacatgctgaacgtgacatcagtgtt
gaccgtcccgatcccgaccatgatagggctatgatcagagcagataaggatcaacgcagg
cgtgttgaaaaagaaaaggagaggagagaagacagagacaggagggaatgtgagcgggat
gatagagattatgatcatgatggaaatcgagacttcaaccaacgattccctcacaagcgg
aaacctgctcgtagagttgaagattcagctgctgaacaaggtggggatggcgatgagagc
tttggaggaatgaatcctgtttcatcaacttatgatgataaaaatgctgtaaaaagtgca
ttaagtcaagagcttgccttttgtgacaaagtcaaggagacattgcacaatcctgaaaat
taccaggaatttttgaggtgtcttcatctctataccagagaaataatcacacgatcagag
ttgcaatctttggtgggtgatttgcttggaaaatatccggatctcatggatgggttcaat
gaattcttggcactatgtgaaaaaaaggagggcctacttgctggtgttgtgagtaaaaaa
tcactgtggaatgaaggtaatttacccagagttttgaaagtagaagaccgagatagagat
cgggatcgtgagagagatgatggggtcaaagatagagaccgtgaaatccgagaaagggat
aggcttgacaaaagtgtagcctttggaaataaggacacgggaggtcacaaaatgtcttta
tttcccagcaaggataagcttccagcaaaacccattaatgaacttgacttatctaactgc
gagcgctgcactcccagttatcggcttctaccaaagagttacatgatacctcctgcaagt
cagaggaccgagcttggtgctgaagtactgaatgatcattgggtatctgttacttcagga
agcgaagattactcttttaaacatatgcggaaaaaccagtatgaagagagcttgtttcga
tgtgaagatgacaggtttgagctggacatgttgttagaatctgtgaatgtaaccaccaag
cgtgtggaggaattattagaaaagatcaacaataacacgatcaaaatggatagtccaatc
cgtattgatgagcacttaacagctctgaatctgaggtgtgttgaacgtttatatggtgac
cacgggcttgatgtaatggatgtattgaggaagaacacttctcttgctttgccagttata
ttaactcgcttgaagcagaaacaagaagagtgggcaaggtgtcgtgctgattttaacaaa
gtttgggctgaaatttatgccaaaaactatcacaaatcacttgatcatcgtagcttctat
ttcaagcagcaggatacaaagagcttgagcacaaaagccttactggcggagatcaaagaa
attagtgagaataagcgcaaggaagatgatgtgcttcttgcttttgctgctggaaacaga
cgacctattataccaaatttggaatttgagtacctagatcctgacactcatgaggacttg
tatcaactcatcaaatattcatgtgcagaagtttgtacaactgaacagttagataaagtg
atgaagatttggacaaccttcttggaacccatgcttggtgttccgtcccggcctcagggt
gccgaggacactgaagatgttgtaaaagctaagaatcagtcttctaaaagtggagagagt
gaagacagccctagtggtggtggtgcggtcacaaactccaaacattcgaatccttcaaga
aatggagatgaaagtatccaacctgaacaatcaagttctagcagggcttggatgctaaat
ggagaaaacagggttaaagaaaatggttctcctgatgcggatcacgttgctcgcaaaagt
gatacttccacaagcactcttcaacatgataaggtgctgatcaatgcagctgcagctgat
gaattgtcaggggtcactaaacaagctccttccaatgaccggctacaaaattcaaatgca
tctcttgtcactggggcagagttaagtaatggacgaactcttgttgaatcagggcttagt
gctaccccttcaagaccaagtaatggcactgttgagggagggcttggaataggttcgagt
aatgagatattaccgtcaacagagggtggtgaattttcaagaccccctgtatccacaaat
ggggtggcaacagaagtcatcaagagtaacagatataatgatgaatctgctgcacaattt
aaaattgaaagagaagagggtgaattatctccaaatggagattttgaggaggataatttt
gcagtttatggagaagctggtttggaggcagcgcataaggtgaaggacagtgctgttagt
aggcaatatcaagccagacagggagaagaatgtggagaggcaggggcggagaatgacgct
gatgctgatgatgaaggtggtgaaagtgctcaaaggtcatcagaggatagtgagaatgcc
tctgagaatggtgatgtttctggaagtgagtctggtgatggtgaagattgctctcgggaa
gagcatgaggaagatggtgaccatgatgagcatgataataaagctgagagtgaaggtgag
gctgaaggaatggctgatgcccacgatgttgaaggagaaggaacgattttaccattttca
gaacgttttcttctaaatgtgaagcctttggcaaagcatgtccccccttcattgcatgac
aaagaaaaaggttctcgggttttctatggcaatgattccttctatgtgctttttaggctt
caccaaacattatatgagagaatacaatcagcaaaggttaattcatcatctgccgagagg
aaatggagagcttcaaatgacactagtcctactgatctttatgccagattcatgagtgca
ctttacaacttacttgatggttcttctgacaatacaaaatttgaggatgattgccgggct
attattgggacacagtcatatgttctattcacattggacaaactaatatataagcttgtc
aaacagctccaaacggtggcaacggatgaaatggacaacaagttgctccaactatatgca
tatgaaaaatcaaggaaacatggaagatttgtggatattgtttgtcatgaaaatgctcgc
gtgcttcttcatgatgagaacatatatcgtattgaatgttcttctgcaccaacccgcttg
tctattcagcttatggactttggacacgataaacccgaagttactgctgtttccatggat
cctaattttgcatcatatctgcataatgatttcctctccgttgttcccgacaaaaaagag
aagccagggattttcttgaagaggaataaacatagatattcagatgctgacgagtgccag
gccatggaagggtttcgggttttgaacggtttagagtgtaaaattgcttgcaattcctca
aaggtatcctatgttttagacacagaagattttttgttccgaccacaaaagaaaagcaaa
actttgcagcagaatggctcatgccacgacgaccaggcaaagatttccaaaagagtacaa
cggtttcacagactgctatctagctcatcataa
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