KEGG   Populus nigra (Lombardy poplar): 133706208
Entry
133706208         CDS       T10372                                 
Name
(RefSeq) protein HSH49
  KO
K12831  splicing factor 3B subunit 4
Organism
pnz  Populus nigra (Lombardy poplar)
Pathway
pnz03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pnz00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    133706208
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pnz03041]
    133706208
Spliceosome [BR:pnz03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    133706208
 Complex B
    133706208
 Complex C
   U2 SnRNP specific factors
    133706208
SSDB
Motif
Pfam: RRM_1
Other DBs
NCBI-GeneID: 133706208
NCBI-ProteinID: XP_061987671
LinkDB
Position
11:complement(4929903..4935252)
AA seq 196 aa
MSGPSSCSIYIGNLDERVSDRVLYDILIQAGRVVDLHIPRDRETDKPKGYAFAEYETEEI
ADYAVKLFSGLVTLYNRTLKFAISGQDKLAQNNFNGAVPAPNSSNRQRPSHPVPINNLEI
PNYSMRLSAPSRVSAYPANDSLAPPGVTNLSNGYGSNSNGNSNDSDRRLFGSAVNAISRS
RSRWELENLSPSTIAG
NT seq 591 nt   +upstreamnt  +downstreamnt
atgtctggtccctcgagctgcagcatttacatcggtaatttagacgagcgagttagcgac
agggttttgtatgacattctaattcaagcaggccgtgtcgtggatctacacattcctcga
gatagagaaactgataagcccaaaggctatgcttttgccgaatatgaaactgaagaaatt
gccgattatgctgtcaagctattctccggccttgtcactctctacaatcgcaccttgaaa
ttcgcgatatctggacaggataaacttgcgcaaaataatttcaatggggctgtgcctgct
cccaattcttctaacagacaaaggccatctcaccctgtaccgattaataatttagaaatc
cctaattattccatgaggttgtcggcacctagcagggtttcagcttaccctgcaaatgat
tctctagctcctcctggtgtaacaaacctttctaatggatatggttcaaattccaatggc
aacagtaatgatagtgatcgaagactttttgggtctgcagtcaatgccattagccgttct
aggtctcgttgggagctagagaatctgtcgccatctacaattgctggataa

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